Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit gamma

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 1 CH_arhy_669 2 3 0.000538871
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_670 2 3 0.000538871
Davidia involucrata GWHABJS00000005 1 CH_din_322 2 2 0.000150038
Lonicera japonica GWHAAZE00000005 1 CH_lonja_595 2 5 0.00059882
Malus domestica Chr10 1 CH_mdo_543 2 2 0.000227527
Punica granatum NC_045130.1 1 CH_pgr_271 2 2 0.000225107
Trochodendron aralioides group11 1 CH_tar_331 2 2 0.00018011
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 2 CH_arhy_669 2 3 0.000538871
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_670 2 3 0.000538871
Davidia involucrata GWHABJS00000005 2 CH_din_322 2 2 0.000150038
Lonicera japonica GWHAAZE00000005 2 CH_lonja_595 2 5 0.00059882
Malus domestica Chr10 2 CH_mdo_543 2 2 0.000227527
Punica granatum NC_045130.1 2 CH_pgr_271 2 2 0.000225107
Trochodendron aralioides group11 2 CH_tar_331 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001