Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_15 1 CH_amhyb_119 2 2 0.0000841751
Arabidopsis thaliana Chr4 1 CH_ath_212 2 2 0.0000286492
Citrus clementina scaffold_1 1 CH_ccl_283 2 2 0.0000820311
Daucus carota DCARv2_Chr3 1 CH_dca_396 2 3 0.000573967
Fragaria x ananassa Fvb6-2 1 CH_fan_615 2 2 0.000832663
Prunus persica Pp03 1 CH_ppe_317 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_278 3 6 0.000000190692
Solanum tuberosum ST4.03ch01 1 CH_stu_451 2 2 0.000153736
Amaranthus hybridus AmaHy_arrow1_Scaffold_15 2 CH_amhyb_119 2 2 0.0000841751
Arabidopsis thaliana Chr4 2 CH_ath_212 2 2 0.0000286492
Citrus clementina scaffold_1 2 CH_ccl_283 2 2 0.0000820311
Daucus carota DCARv2_Chr3 2 CH_dca_396 2 3 0.000573967
Fragaria x ananassa Fvb6-2 2 CH_fan_615 2 2 0.000832663
Prunus persica Pp03 2 CH_ppe_317 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_278 3 6 0.000000190692
Solanum tuberosum ST4.03ch01 2 CH_stu_451 2 2 0.000153736

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001