Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_307 2 2 0.000198013
Brassica rapa A06 1 CH_bra_370 2 3 0.000772726
Camellia sinensis var. sinensis Chr3 1 CH_camsi_537 2 2 0.0000458547
Citrullus lanatus CG_Chr11 1 CH_cla_212 2 3 0.000798344
Cucumis melo chr11 1 CH_cme_234 2 2 0.000200133
Carica papaya supercontig_139 1 CH_cpa_208 2 2 0.0000950661
Cucumis sativus L. chr2 1 CH_csa_259 2 2 0.000250428
Durio zibethinus NW_019167915.1 1 CH_dzi_282 2 2 0.000278093
Gossypium raimondii Chr05 1 CH_gra_412 2 2 0.000536107
Gossypium raimondii Chr08 1 CH_gra_413 2 2 0.000536107
Helianthus annuus HanXRQChr04 1 CH_han_573 2 2 0.000231857
Lupinus albus Lalb_Chr18 1 CH_lal_356 2 2 0.000524824
Oryza sativa ssp. japonica chr03 1 CH_osa_347 2 4 0.000475289
Striga asiatica scaffold201 1 CH_sas_131 2 3 0.000562805
Theobroma cacao Chromosome_2 1 CH_tca_345 2 2 0.000219716
Arabidopsis lyrata scaffold_4 2 CH_aly_307 2 2 0.000198013
Brassica rapa A06 2 CH_bra_370 2 3 0.000772726
Camellia sinensis var. sinensis Chr3 2 CH_camsi_537 2 2 0.0000458547
Citrullus lanatus CG_Chr11 2 CH_cla_212 2 3 0.000798344
Cucumis melo chr11 2 CH_cme_234 2 2 0.000200133
Carica papaya supercontig_139 2 CH_cpa_208 2 2 0.0000950661
Cucumis sativus L. chr2 2 CH_csa_259 2 2 0.000250428
Durio zibethinus NW_019167915.1 2 CH_dzi_282 2 2 0.000278093
Eucalyptus grandis Chr07 2 CH_egr_461 3 7 0.000000179821
Gossypium raimondii Chr05 2 CH_gra_412 2 2 0.000536107
Gossypium raimondii Chr08 2 CH_gra_413 2 2 0.000536107
Helianthus annuus HanXRQChr04 2 CH_han_573 2 2 0.000231857
Lupinus albus Lalb_Chr18 2 CH_lal_356 2 2 0.000524824
Oryza sativa ssp. japonica chr03 2 CH_osa_347 2 4 0.000475289
Striga asiatica scaffold201 2 CH_sas_131 2 3 0.000562805
Theobroma cacao Chromosome_2 2 CH_tca_345 2 2 0.000219716

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001