Functional clusters

Information

  • Type MapMan
  • Description Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 1 CH_arhy_765 2 3 0.000898109
Capsicum annuum PGAv.1.6.scaffold1549 1 CH_can_333 2 2 0.000247831
Corylus avellana 1 1 CH_cav_342 2 2 0.000230008
Carpinus fangiana Cfa04 1 CH_cfa_339 2 2 0.000454408
Corchorus olitorius AWUE01015649.1 1 CH_col_109 2 2 0.000876296
Micromonas commoda Chr_01 1 CH_mco_30 2 2 0.000593883
Rhododendron simsii chr13 1 CH_rsi_484 2 2 0.000387184
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 2 CH_arhy_765 2 3 0.000898109
Capsicum annuum PGAv.1.6.scaffold1549 2 CH_can_333 2 2 0.000247831
Corylus avellana 1 2 CH_cav_342 2 2 0.000230008
Carpinus fangiana Cfa04 2 CH_cfa_339 2 2 0.000454408
Corchorus olitorius AWUE01015649.1 2 CH_col_109 2 2 0.000876296
Micromonas commoda Chr_01 2 CH_mco_30 2 2 0.000593883
Rhododendron simsii chr13 2 CH_rsi_484 2 2 0.000387184

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001