Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.electron supply module.electron shuttle hemoprotein (Cyt-b5)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Carya illinoinensis | Chr16 | 1 | CH_cil_179 | 4 | 7 | 0.0000000123694 |
Helianthus annuus | HanXRQChr04 | 1 | CH_han_60 | 5 | 5 | 0.0000000000000730586 |
Magnolia biondii | Chr07 | 1 | CH_mbi_289 | 3 | 10 | 0.0000237567 |
Marchantia polymorpha | scaffold_153 | 1 | CH_mpo_68 | 2 | 2 | 0.000110442 |
Nelumbo nucifera | chr1 | 1 | CH_nnu_430 | 2 | 2 | 0.000654022 |
Striga asiatica | scaffold6 | 1 | CH_sas_150 | 2 | 2 | 0.000938057 |
Carya illinoinensis | Chr16 | 2 | CH_cil_179 | 4 | 7 | 0.0000000123694 |
Helianthus annuus | HanXRQChr04 | 2 | CH_han_60 | 5 | 5 | 0.0000000000000730586 |
Magnolia biondii | Chr07 | 2 | CH_mbi_289 | 3 | 10 | 0.0000237567 |
Marchantia polymorpha | scaffold_153 | 2 | CH_mpo_68 | 2 | 2 | 0.000110442 |
Nelumbo nucifera | chr1 | 2 | CH_nnu_430 | 2 | 2 | 0.000654022 |
Striga asiatica | scaffold6 | 2 | CH_sas_150 | 2 | 2 | 0.000938057 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |