Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.callose.callose synthase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 1 | CH_aag_194 | 2 | 2 | 0.000802568 |
| Acer truncatum | chr2 | 1 | CH_acertr_251 | 3 | 8 | 0.0000687993 |
| Actinidia chinensis | Lachesis_group19 | 1 | CH_ach_21 | 4 | 5 | 0.00000000437504 |
| Citrullus lanatus | CG_Chr03 | 1 | CH_cla_75 | 4 | 15 | 0.00000203619 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 1 | CH_lsa_357 | 3 | 6 | 0.0000767288 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 1 | CH_lsa_366 | 3 | 7 | 0.000134231 |
| Micromonas commoda | Chr_02 | 1 | CH_mco_28 | 2 | 2 | 0.000197961 |
| Quercus lobata | 4 | 1 | CH_qlo_497 | 4 | 16 | 0.00000102263 |
| Sequoiadendron giganteum | chr9 | 1 | CH_sgi_583 | 3 | 3 | 0.000000783163 |
| Sapria himalayana | scaffold89_1656250 | 1 | CH_shi_55 | 3 | 11 | 0.0000144095 |
| Trochodendron aralioides | group3 | 1 | CH_tar_216 | 3 | 5 | 0.0000154554 |
| Theobroma cacao | Chromosome_9 | 1 | CH_tca_272 | 3 | 6 | 0.0000585164 |
| Zea mays | 5 | 1 | CH_zma_98 | 3 | 3 | 0.0000014275 |
| Anthoceros agrestis | Sc2ySwM_344 | 2 | CH_aag_194 | 2 | 2 | 0.000802568 |
| Acer truncatum | chr2 | 2 | CH_acertr_251 | 3 | 8 | 0.0000687993 |
| Actinidia chinensis | Lachesis_group19 | 2 | CH_ach_21 | 4 | 5 | 0.00000000437504 |
| Citrullus lanatus | CG_Chr03 | 2 | CH_cla_75 | 4 | 15 | 0.00000203619 |
| Eucalyptus grandis | Chr01 | 2 | CH_egr_501 | 4 | 11 | 0.000000605882 |
| Eucalyptus grandis | Chr01 | 2 | CH_egr_523 | 4 | 13 | 0.00000131181 |
| Gossypium hirsutum | D02 | 2 | CH_ghi_587 | 3 | 7 | 0.000223701 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 2 | CH_lsa_357 | 3 | 6 | 0.0000767288 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 2 | CH_lsa_366 | 3 | 7 | 0.000134231 |
| Micromonas commoda | Chr_02 | 2 | CH_mco_28 | 2 | 2 | 0.000197961 |
| Quercus lobata | 4 | 2 | CH_qlo_497 | 4 | 16 | 0.00000102263 |
| Sequoiadendron giganteum | chr9 | 2 | CH_sgi_583 | 3 | 3 | 0.000000783163 |
| Sapria himalayana | scaffold89_1656250 | 2 | CH_shi_55 | 3 | 11 | 0.0000144095 |
| Trochodendron aralioides | group3 | 2 | CH_tar_216 | 3 | 5 | 0.0000154554 |
| Theobroma cacao | Chromosome_9 | 2 | CH_tca_272 | 3 | 6 | 0.0000585164 |
| Zea mays | 5 | 2 | CH_zma_98 | 3 | 3 | 0.0000014275 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |