Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.lignin.monolignol biosynthesis.cinnamyl-alcohol dehydrogenase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr5 | 1 | CH_acertr_118 | 4 | 17 | 0.0000000374826 |
Camellia sinensis var. sinensis | Chr3 | 1 | CH_camsi_940 | 2 | 3 | 0.000825341 |
Malus domestica | Chr10 | 1 | CH_mdo_717 | 2 | 4 | 0.000682538 |
Prunus persica | Pp08 | 1 | CH_ppe_395 | 2 | 3 | 0.00022378 |
Rosa chinensis | RcHm_v2.0_Chr6 | 1 | CH_rch_605 | 2 | 2 | 0.000119596 |
Sequoiadendron giganteum | chr3 | 1 | CH_sgi_274 | 4 | 5 | 0.00000000000867093 |
Tripterygium wilfordii | NC_052238.1 | 1 | CH_twi_221 | 2 | 2 | 0.000167252 |
Vitis vinifera | chr3 | 1 | CH_vvi_414 | 2 | 3 | 0.000684523 |
Acer truncatum | chr5 | 2 | CH_acertr_118 | 4 | 17 | 0.0000000374826 |
Camellia sinensis var. sinensis | Chr3 | 2 | CH_camsi_940 | 2 | 3 | 0.000825341 |
Malus domestica | Chr10 | 2 | CH_mdo_717 | 2 | 4 | 0.000682538 |
Prunus persica | Pp08 | 2 | CH_ppe_395 | 2 | 3 | 0.00022378 |
Rosa chinensis | RcHm_v2.0_Chr6 | 2 | CH_rch_605 | 2 | 2 | 0.000119596 |
Sequoiadendron giganteum | chr3 | 2 | CH_sgi_274 | 4 | 5 | 0.00000000000867093 |
Tripterygium wilfordii | NC_052238.1 | 2 | CH_twi_221 | 2 | 2 | 0.000167252 |
Vitis vinifera | chr3 | 2 | CH_vvi_414 | 2 | 3 | 0.000684523 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |