Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.lignin.monolignol biosynthesis.cinnamyl-alcohol dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_118 4 17 0.0000000374826
Camellia sinensis var. sinensis Chr3 1 CH_camsi_940 2 3 0.000825341
Malus domestica Chr10 1 CH_mdo_717 2 4 0.000682538
Prunus persica Pp08 1 CH_ppe_395 2 3 0.00022378
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_605 2 2 0.000119596
Sequoiadendron giganteum chr3 1 CH_sgi_274 4 5 0.00000000000867093
Tripterygium wilfordii NC_052238.1 1 CH_twi_221 2 2 0.000167252
Vitis vinifera chr3 1 CH_vvi_414 2 3 0.000684523
Acer truncatum chr5 2 CH_acertr_118 4 17 0.0000000374826
Camellia sinensis var. sinensis Chr3 2 CH_camsi_940 2 3 0.000825341
Malus domestica Chr10 2 CH_mdo_717 2 4 0.000682538
Prunus persica Pp08 2 CH_ppe_395 2 3 0.00022378
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_605 2 2 0.000119596
Sequoiadendron giganteum chr3 2 CH_sgi_274 4 5 0.00000000000867093
Tripterygium wilfordii NC_052238.1 2 CH_twi_221 2 2 0.000167252
Vitis vinifera chr3 2 CH_vvi_414 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001