Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.lignin.monolignol biosynthesis.ferulate 5-hydroxylase (F5H)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_437 2 2 0.000211491
Carica papaya supercontig_6 1 CH_cpa_349 2 2 0.000570396
Carica papaya supercontig_150 1 CH_cpa_350 2 2 0.000570396
Helianthus annuus HanXRQChr11 1 CH_han_353 3 11 0.00000738812
Manihot esculenta Chromosome04 1 CH_mes_427 2 2 0.000366379
Petunia axillaris Peaxi162Scf00083 1 CH_pax_213 2 2 0.0000703556
Phaseolus vulgaris Chr03 1 CH_pvu_366 2 2 0.000220418
Quercus lobata 11 1 CH_qlo_821 2 2 0.000154887
Tripterygium wilfordii NC_052245.1 1 CH_twi_229 3 39 0.000170137
Acer truncatum chr5 2 CH_acertr_437 2 2 0.000211491
Carica papaya supercontig_6 2 CH_cpa_349 2 2 0.000570396
Carica papaya supercontig_150 2 CH_cpa_350 2 2 0.000570396
Helianthus annuus HanXRQChr11 2 CH_han_353 3 11 0.00000738812
Manihot esculenta Chromosome04 2 CH_mes_427 2 2 0.000366379
Petunia axillaris Peaxi162Scf00083 2 CH_pax_213 2 2 0.0000703556
Phaseolus vulgaris Chr03 2 CH_pvu_366 2 2 0.000220418
Quercus lobata 11 2 CH_qlo_821 2 2 0.000154887
Tripterygium wilfordii NC_052245.1 2 CH_twi_229 3 39 0.000170137

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001