Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.pectin.modification and degradation.pectin lyase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_181 3 5 0.000002708
Arabidopsis thaliana Chr2 1 CH_ath_182 3 5 0.000002708
Carpinus fangiana Cfa08 1 CH_cfa_235 2 2 0.0000757346
Carya illinoinensis Chr12 1 CH_cil_364 2 2 0.0000619828
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_340 2 2 0.0000514007
Arabidopsis thaliana Chr1 2 CH_ath_181 3 5 0.000002708
Arabidopsis thaliana Chr2 2 CH_ath_182 3 5 0.000002708
Carpinus fangiana Cfa08 2 CH_cfa_235 2 2 0.0000757346
Carya illinoinensis Chr12 2 CH_cil_364 2 2 0.0000619828
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_340 2 2 0.0000514007

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001