Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.pectin.rhamnogalacturonan I.biosynthesis.beta-1,4-galactosyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group26 1 CH_ach_188 2 2 0.000325928
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 1 CH_arhy_502 2 2 0.00017963
Beta vulgaris Chr7_EL10_PGA_scaffold5 1 CH_bvu_226 2 2 0.000248375
Chenopodium quinoa C_Quinoa_Scaffold_4071 1 CH_cqu_134 3 3 0.0000000336768
Papaver somniferum NC_039362.1 1 CH_pso_672 2 3 0.000675676
Simmondsia chinensis GWHAASQ00000017 1 CH_sci_219 2 2 0.000255428
Sequoiadendron giganteum chr9 1 CH_sgi_844 2 2 0.0000487151
Actinidia chinensis Lachesis_group26 2 CH_ach_188 2 2 0.000325928
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 2 CH_arhy_502 2 2 0.00017963
Beta vulgaris Chr7_EL10_PGA_scaffold5 2 CH_bvu_226 2 2 0.000248375
Chenopodium quinoa C_Quinoa_Scaffold_4071 2 CH_cqu_134 3 3 0.0000000336768
Papaver somniferum NC_039362.1 2 CH_pso_672 2 3 0.000675676
Simmondsia chinensis GWHAASQ00000017 2 CH_sci_219 2 2 0.000255428
Sequoiadendron giganteum chr9 2 CH_sgi_844 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001