Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.pectin.rhamnogalacturonan I.biosynthesis.rhamnosyltransferase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr11 | 1 | CH_acertr_552 | 2 | 2 | 0.00070497 |
| Camellia sinensis var. sinensis | Chr12 | 1 | CH_camsi_271 | 3 | 3 | 0.000000110392 |
| Prunus persica | Pp01 | 1 | CH_ppe_506 | 2 | 2 | 0.000745962 |
| Quercus lobata | 3 | 1 | CH_qlo_969 | 2 | 2 | 0.000516289 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_729 | 2 | 2 | 0.000398653 |
| Theobroma cacao | Chromosome_2 | 1 | CH_tca_35 | 5 | 5 | 0.0000000000000120866 |
| Acer truncatum | chr11 | 2 | CH_acertr_552 | 2 | 2 | 0.00070497 |
| Camellia sinensis var. sinensis | Chr12 | 2 | CH_camsi_271 | 3 | 3 | 0.000000110392 |
| Prunus persica | Pp01 | 2 | CH_ppe_506 | 2 | 2 | 0.000745962 |
| Quercus lobata | 3 | 2 | CH_qlo_969 | 2 | 2 | 0.000516289 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_729 | 2 | 2 | 0.000398653 |
| Theobroma cacao | Chromosome_2 | 2 | CH_tca_35 | 5 | 5 | 0.0000000000000120866 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |