Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.arabinogalactan.biosynthesis.beta-1,6-galactosyltransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB07 1 CH_bca_530 2 2 0.0000213764
Glycine max Gm12 1 CH_gma_120 3 3 0.00000000864398
Hydrangea macrophylla Hma1.2p1_0305F.1 1 CH_hma_216 2 2 0.000111086
Rhododendron simsii chr13 1 CH_rsi_405 2 3 0.000193586
Utricularia gibba unitig_899 1 CH_ugi_254 2 2 0.000440755
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_83 3 3 0.0000000129529
Brassica carinata ChrB07 2 CH_bca_530 2 2 0.0000213764
Eucalyptus grandis Chr02 2 CH_egr_679 2 2 0.0000585274
Glycine max Gm12 2 CH_gma_120 3 3 0.00000000864398
Hydrangea macrophylla Hma1.2p1_0305F.1 2 CH_hma_216 2 2 0.000111086
Rhododendron simsii chr13 2 CH_rsi_405 2 3 0.000193586
Utricularia gibba unitig_899 2 CH_ugi_254 2 2 0.000440755
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_83 3 3 0.0000000129529

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001