Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.heteromannan.modification and degradation.mannan O-acetyltransferase (MOAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Glycine max Gm08 1 CH_gma_557 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_452 2 2 0.000308404
Papaver somniferum NC_039368.1 1 CH_pso_19 7 8 5.29314e-22
Papaver somniferum NW_020631041.1 1 CH_pso_331 3 5 0.00000346157
Salvia bowleyana GWHASIU00000001 1 CH_sbo_295 3 22 0.0000477679
Sechium edule LG01 1 CH_sed_295 2 2 0.000428052
Vanilla planifolia CM028151.1 1 CH_vpl_320 2 2 0.000443328
Glycine max Gm08 2 CH_gma_557 2 2 0.000569336
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_452 2 2 0.000308404
Papaver somniferum NC_039368.1 2 CH_pso_19 7 8 5.29314e-22
Papaver somniferum NW_020631041.1 2 CH_pso_331 3 5 0.00000346157
Salvia bowleyana GWHASIU00000001 2 CH_sbo_295 3 22 0.0000477679
Sechium edule LG01 2 CH_sed_295 2 2 0.000428052
Vanilla planifolia CM028151.1 2 CH_vpl_320 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001