Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.heteromannan.biosynthesis.mannan synthase activities.mannan synthase (CSLA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR02 1 CH_aox_274 2 2 0.000481193
Cucumis sativus L. chr6 1 CH_csa_320 2 2 0.000834759
Daucus carota DCARv2_Chr5 1 CH_dca_18 6 7 8.31843e-16
Helianthus annuus HanXRQChr14 1 CH_han_22 8 26 8.13739e-20
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_95 5 22 0.000000000173408
Medicago truncatula chr1 1 CH_mtr_171 4 6 0.000000000218451
Physcomitrium patens Chr17 1 CH_ppa_319 2 2 0.000919089
Prunus persica Pp02 1 CH_ppe_449 2 2 0.000447577
Papaver somniferum NC_039366.1 1 CH_pso_12 11 50 1.21488e-25
Papaver somniferum NC_039368.1 1 CH_pso_20 9 29 1.22571e-21
Salvia bowleyana GWHASIU00000006 1 CH_sbo_149 3 4 0.0000001242
Aquilegia oxysepala CHR02 2 CH_aox_274 2 2 0.000481193
Cucumis sativus L. chr6 2 CH_csa_320 2 2 0.000834759
Daucus carota DCARv2_Chr5 2 CH_dca_18 6 7 8.31843e-16
Helianthus annuus HanXRQChr14 2 CH_han_22 8 26 8.13739e-20
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_95 5 22 0.000000000173408
Physcomitrium patens Chr17 2 CH_ppa_319 2 2 0.000919089
Prunus persica Pp02 2 CH_ppe_449 2 2 0.000447577
Papaver somniferum NC_039366.1 2 CH_pso_12 11 50 1.21488e-25
Papaver somniferum NC_039368.1 2 CH_pso_20 9 29 1.22571e-21
Salvia bowleyana GWHASIU00000006 2 CH_sbo_149 3 4 0.0000001242

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001