Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.hemicellulose.xyloglucan.modification and degradation.xyloglucan O-acetyltransferase (AXY4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 1 CH_arhy_178 4 15 0.00000000384398
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_358 3 10 0.00000564443
Erythranthe guttata scaffold_5 1 CH_egut_295 2 2 0.0000728147
Glycine max Gm01 1 CH_gma_114 4 7 0.00000000410344
Glycine max Gm02 1 CH_gma_12 8 9 4.1419e-25
Lupinus albus Lalb_Chr05 1 CH_lal_31 4 4 0.00000000000216854
Lotus japonicus chr2 1 CH_lja_3 10 17 6.74522e-30
Medicago truncatula chr5 1 CH_mtr_160 4 6 0.000000000109229
Punica granatum NC_045129.1 1 CH_pgr_206 2 2 0.0000750356
Pisum sativum chr2LG1 1 CH_psa_25 6 35 0.000000000000114214
Phaseolus vulgaris Chr02 1 CH_pvu_66 4 5 0.000000000029748
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_114 3 4 0.000000343786
Vigna mungo CM024074.1 1 CH_vmu_58 3 3 0.00000000626267
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 2 CH_arhy_178 4 15 0.00000000384398
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_358 3 10 0.00000564443
Erythranthe guttata scaffold_5 2 CH_egut_295 2 2 0.0000728147
Glycine max Gm01 2 CH_gma_114 4 7 0.00000000410344
Glycine max Gm02 2 CH_gma_12 8 9 4.1419e-25
Lupinus albus Lalb_Chr05 2 CH_lal_31 4 4 0.00000000000216854
Lotus japonicus chr2 2 CH_lja_3 10 17 6.74522e-30
Punica granatum NC_045129.1 2 CH_pgr_206 2 2 0.0000750356
Pisum sativum chr2LG1 2 CH_psa_25 6 35 0.000000000000114214
Phaseolus vulgaris Chr02 2 CH_pvu_66 4 5 0.000000000029748
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_114 3 4 0.000000343786
Vigna mungo CM024074.1 2 CH_vmu_58 3 3 0.00000000626267

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001