Functional clusters
Information
- Type MapMan
- Description Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.1,6-alpha-xylosyltransferase (XXT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Carpinus fangiana | Cfa03 | 1 | CH_cfa_384 | 2 | 2 | 0.000757346 |
| Oryza sativa ssp. japonica | chr03 | 1 | CH_osa_376 | 3 | 47 | 0.000676436 |
| Papaver somniferum | NC_039367.1 | 1 | CH_pso_211 | 3 | 3 | 0.0000000426135 |
| Papaver somniferum | NC_039359.1 | 1 | CH_pso_261 | 3 | 4 | 0.000000170445 |
| Rhododendron simsii | chr04 | 1 | CH_rsi_39 | 6 | 6 | 5.289e-18 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_82 | 3 | 3 | 0.0000000129529 |
| Carpinus fangiana | Cfa03 | 2 | CH_cfa_384 | 2 | 2 | 0.000757346 |
| Oryza sativa ssp. japonica | chr03 | 2 | CH_osa_376 | 3 | 47 | 0.000676436 |
| Papaver somniferum | NC_039367.1 | 2 | CH_pso_211 | 3 | 3 | 0.0000000426135 |
| Papaver somniferum | NC_039359.1 | 2 | CH_pso_261 | 3 | 4 | 0.000000170445 |
| Rhododendron simsii | chr04 | 2 | CH_rsi_39 | 6 | 6 | 5.289e-18 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_82 | 3 | 3 | 0.0000000129529 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |