Functional clusters

Information

  • Type MapMan
  • Description Cell wall organisation.cellulose.cellulose modification.class-C endo-1,4-beta-glucanase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr12 1 CH_camsi_388 3 9 0.0000026485
Cannabis sativa NC_044374.1 1 CH_cansat_365 2 3 0.000590945
Helianthus annuus HanXRQChr13 1 CH_han_382 3 8 0.0000150434
Oryza sativa ssp. japonica chr01 1 CH_osa_324 2 3 0.000316874
Sequoiadendron giganteum chr6 1 CH_sgi_1373 2 2 0.000730727
Camellia sinensis var. sinensis Chr12 2 CH_camsi_388 3 9 0.0000026485
Cannabis sativa NC_044374.1 2 CH_cansat_365 2 3 0.000590945
Helianthus annuus HanXRQChr13 2 CH_han_382 3 8 0.0000150434
Oryza sativa ssp. japonica chr01 2 CH_osa_324 2 3 0.000316874
Sequoiadendron giganteum chr6 2 CH_sgi_1373 2 2 0.000730727

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001