Functional clusters

Information

  • Type MapMan
  • Description Cytoskeleton organisation.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.cofactor (TFC-D)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 1 1 CH_cav_247 2 2 0.0000766695
Cardamine hirsuta Chr6 1 CH_chi_51 4 4 0.000000000004954
Capsella rubella scaffold_2 1 CH_cru_319 2 2 0.000219346
Davidia involucrata GWHABJS00000016 1 CH_din_254 2 2 0.0000500125
Durio zibethinus NW_019167993.1 1 CH_dzi_219 2 3 0.000139043
Lonicera japonica GWHAAZE00000009 1 CH_lonja_372 2 2 0.0000598874
Malus domestica Chr07 1 CH_mdo_713 2 4 0.000682538
Petunia axillaris Peaxi162Scf00013 1 CH_pax_196 2 2 0.0000703556
Quercus lobata 4 1 CH_qlo_658 2 2 0.0000516289
Sequoiadendron giganteum chr9 1 CH_sgi_223 4 4 0.000000000000346852
Sapria himalayana scaffold92_1596972 1 CH_shi_217 2 2 0.000571804
Solanum lycopersicum SL4.0ch01 1 CH_sly_325 2 2 0.0000586941
Tripterygium wilfordii NC_052249.1 1 CH_twi_104 3 6 0.000000372932
Corylus avellana 1 2 CH_cav_247 2 2 0.0000766695
Cardamine hirsuta Chr6 2 CH_chi_51 4 4 0.000000000004954
Capsella rubella scaffold_2 2 CH_cru_319 2 2 0.000219346
Davidia involucrata GWHABJS00000016 2 CH_din_254 2 2 0.0000500125
Durio zibethinus NW_019167993.1 2 CH_dzi_219 2 3 0.000139043
Lonicera japonica GWHAAZE00000009 2 CH_lonja_372 2 2 0.0000598874
Malus domestica Chr07 2 CH_mdo_713 2 4 0.000682538
Petunia axillaris Peaxi162Scf00013 2 CH_pax_196 2 2 0.0000703556
Quercus lobata 4 2 CH_qlo_658 2 2 0.0000516289
Sequoiadendron giganteum chr9 2 CH_sgi_223 4 4 0.000000000000346852
Sapria himalayana scaffold92_1596972 2 CH_shi_217 2 2 0.000571804
Solanum lycopersicum SL4.0ch01 2 CH_sly_325 2 2 0.0000586941
Tripterygium wilfordii NC_052249.1 2 CH_twi_104 3 6 0.000000372932

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001