Functional clusters

Information

  • Type MapMan
  • Description Cytoskeleton organisation.microfilament network.actin-membrane compartment interaction.NET-type actin-membrane nexus protein families.actin-binding protein (NET1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum ctg752_3 1 CH_acertr_53 4 5 0.000000000183935
Actinidia chinensis Lachesis_group3 1 CH_ach_262 2 2 0.000814819
Actinidia chinensis Lachesis_group9 1 CH_ach_263 2 2 0.000814819
Camellia sinensis var. sinensis Chr14 1 CH_camsi_289 3 3 0.000000176627
Gossypium hirsutum D08 1 CH_ghi_282 3 3 0.00000030587
Manihot esculenta Chromosome03 1 CH_mes_456 2 2 0.000610631
Populus trichocarpa Chr08 1 CH_ptr_494 2 2 0.000578001
Trochodendron aralioides group16 1 CH_tar_114 3 3 0.0000000540676
Acer truncatum ctg752_3 2 CH_acertr_53 4 5 0.000000000183935
Actinidia chinensis Lachesis_group3 2 CH_ach_262 2 2 0.000814819
Actinidia chinensis Lachesis_group9 2 CH_ach_263 2 2 0.000814819
Camellia sinensis var. sinensis Chr14 2 CH_camsi_289 3 3 0.000000176627
Gossypium hirsutum D08 2 CH_ghi_282 3 3 0.00000030587
Manihot esculenta Chromosome03 2 CH_mes_456 2 2 0.000610631
Populus trichocarpa Chr08 2 CH_ptr_494 2 2 0.000578001
Trochodendron aralioides group16 2 CH_tar_114 3 3 0.0000000540676

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001