Functional clusters
Information
- Type MapMan
- Description Cytoskeleton organisation.microfilament network.actin polymerisation.actin-depolymerizing factor (ADF)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-4 | 1 | CH_aar_113 | 3 | 4 | 0.0000109835 |
| Arabidopsis thaliana | Chr3 | 1 | CH_ath_249 | 3 | 13 | 0.00007738 |
| Brassica carinata | Contig846 | 1 | CH_bca_21 | 6 | 8 | 0.00000000000000311321 |
| Brassica carinata | ChrC01 | 1 | CH_bca_414 | 3 | 3 | 0.00000373973 |
| Camellia sinensis var. sinensis | Chr3 | 1 | CH_camsi_891 | 3 | 16 | 0.000801261 |
| Magnolia biondii | Chr05 | 1 | CH_mbi_272 | 3 | 8 | 0.0000103964 |
| Quercus lobata | 9 | 1 | CH_qlo_468 | 4 | 13 | 0.000000535971 |
| Rhododendron simsii | chr03 | 1 | CH_rsi_225 | 4 | 15 | 0.000000784579 |
| Selenicereus undatus | Scaffold_33675 | 1 | CH_sun_77 | 3 | 5 | 0.00000665043 |
| Aethionema arabicum | LG-4 | 2 | CH_aar_113 | 3 | 4 | 0.0000109835 |
| Arabidopsis thaliana | Chr3 | 2 | CH_ath_249 | 3 | 13 | 0.00007738 |
| Brassica carinata | Contig846 | 2 | CH_bca_21 | 6 | 8 | 0.00000000000000311321 |
| Brassica carinata | ChrC01 | 2 | CH_bca_414 | 3 | 3 | 0.00000373973 |
| Camellia sinensis var. sinensis | Chr3 | 2 | CH_camsi_891 | 3 | 16 | 0.000801261 |
| Magnolia biondii | Chr05 | 2 | CH_mbi_272 | 3 | 8 | 0.0000103964 |
| Quercus lobata | 9 | 2 | CH_qlo_468 | 4 | 13 | 0.000000535971 |
| Rhododendron simsii | chr03 | 2 | CH_rsi_225 | 4 | 15 | 0.000000784579 |
| Selenicereus undatus | Scaffold_33675 | 2 | CH_sun_77 | 3 | 5 | 0.00000665043 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |