Functional clusters

Information

  • Type MapMan
  • Description Cytoskeleton organisation.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-II formin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 1 CH_aar_34 4 4 0.000000000034176
Arabidopsis thaliana Chr5 1 CH_ath_40 4 4 0.0000000000148148
Brassica carinata ChrC06 1 CH_bca_472 3 6 0.00000931848
Camellia sinensis var. sinensis Chr2 1 CH_camsi_421 3 6 0.00000529681
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_152 3 3 0.000000253709
Helianthus annuus HanXRQChr05 1 CH_han_315 3 3 0.0000018278
Helianthus annuus HanXRQChr16 1 CH_han_539 3 9 0.000153317
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_242 4 16 0.00000175866
Lactuca sativa Lsat_1_v8_lg_5 1 CH_lsa_253 3 3 0.00000269494
Sequoiadendron giganteum chr4 1 CH_sgi_1310 2 2 0.000487151
Selaginella moellendorffii scaffold_0 1 CH_smo_75 3 14 0.0000475419
Vigna mungo CM024074.1 1 CH_vmu_390 2 2 0.000646141
Aethionema arabicum LG-2 2 CH_aar_34 4 4 0.000000000034176
Arabidopsis thaliana Chr5 2 CH_ath_40 4 4 0.0000000000148148
Brassica carinata ChrC06 2 CH_bca_472 3 6 0.00000931848
Camellia sinensis var. sinensis Chr2 2 CH_camsi_421 3 6 0.00000529681
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_152 3 3 0.000000253709
Helianthus annuus HanXRQChr05 2 CH_han_315 3 3 0.0000018278
Helianthus annuus HanXRQChr16 2 CH_han_539 3 9 0.000153317
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_242 4 16 0.00000175866
Lactuca sativa Lsat_1_v8_lg_5 2 CH_lsa_253 3 3 0.00000269494
Sequoiadendron giganteum chr4 2 CH_sgi_1310 2 2 0.000487151
Selaginella moellendorffii scaffold_0 2 CH_smo_75 3 14 0.0000475419
Vigna mungo CM024074.1 2 CH_vmu_390 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001