Functional clusters
Information
- Type MapMan
- Description Cytoskeleton organisation.microfilament network.actin polymerisation.villin actin-crosslinking factor
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Erigeron canadensis | Conyza_canadensis_scaffold:7 | 1 | CH_eca_378 | 3 | 20 | 0.00019247 |
Hydrangea macrophylla | Hma1.2p1_0235F.1 | 1 | CH_hma_61 | 3 | 3 | 0.000000185113 |
Magnolia biondii | Chr06 | 1 | CH_mbi_184 | 3 | 3 | 0.000000297199 |
Nicotiana tabacum | Nitab4.5_0000018 | 1 | CH_nta_110 | 2 | 2 | 0.000109727 |
Sapria himalayana | scaffold5_19632047 | 1 | CH_shi_205 | 2 | 2 | 0.000343083 |
Trifolium pratense | Tp57577_TGAC_v2_LG2 | 1 | CH_tpr_377 | 2 | 2 | 0.000454184 |
Vanilla planifolia | CM028155.1 | 1 | CH_vpl_113 | 3 | 5 | 0.0000135056 |
Erigeron canadensis | Conyza_canadensis_scaffold:7 | 2 | CH_eca_378 | 3 | 20 | 0.00019247 |
Eucalyptus grandis | Chr11 | 2 | CH_egr_865 | 3 | 31 | 0.000460708 |
Hydrangea macrophylla | Hma1.2p1_0235F.1 | 2 | CH_hma_61 | 3 | 3 | 0.000000185113 |
Magnolia biondii | Chr06 | 2 | CH_mbi_184 | 3 | 3 | 0.000000297199 |
Nicotiana tabacum | Nitab4.5_0000018 | 2 | CH_nta_110 | 2 | 2 | 0.000109727 |
Sapria himalayana | scaffold5_19632047 | 2 | CH_shi_205 | 2 | 2 | 0.000343083 |
Trifolium pratense | Tp57577_TGAC_v2_LG2 | 2 | CH_tpr_377 | 2 | 2 | 0.000454184 |
Vanilla planifolia | CM028155.1 | 2 | CH_vpl_113 | 3 | 5 | 0.0000135056 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |