Functional clusters
Information
- Type MapMan
- Description Cytoskeleton organisation.microfilament network.actin filament protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_4 | 1 | CH_aly_164 | 3 | 3 | 0.00000143772 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 1 | CH_amhyb_75 | 3 | 4 | 0.00000357039 |
| Arabidopsis thaliana | Chr2 | 1 | CH_ath_239 | 3 | 12 | 0.0000446516 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 1 | CH_bvu_303 | 2 | 2 | 0.000827917 |
| Chara braunii | BFEA01000274 | 1 | CH_cbr_52 | 3 | 10 | 0.0000325613 |
| Erythranthe guttata | scaffold_14 | 1 | CH_egut_213 | 3 | 4 | 0.00000267176 |
| Gossypium hirsutum | D11 | 1 | CH_ghi_406 | 3 | 3 | 0.00000977392 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 1 | CH_lsa_72 | 6 | 33 | 0.00000000000412454 |
| Magnolia biondii | Chr09 | 1 | CH_mbi_297 | 3 | 12 | 0.0000272194 |
| Marchantia polymorpha | scaffold_16 | 1 | CH_mpo_132 | 2 | 3 | 0.000993889 |
| Nelumbo nucifera | chr7 | 1 | CH_nnu_446 | 2 | 2 | 0.000654022 |
| Nicotiana tabacum | Nitab4.5_0000032 | 1 | CH_nta_79 | 3 | 7 | 0.0000353629 |
| Petunia axillaris | Peaxi162Scf00765 | 1 | CH_pax_140 | 4 | 16 | 0.00000450424 |
| Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_22 | 8 | 30 | 2.22851e-18 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_357 | 4 | 6 | 0.00000000171637 |
| Solanum tuberosum | ST4.03ch04 | 1 | CH_stu_211 | 4 | 14 | 0.000000403629 |
| Arabidopsis lyrata | scaffold_4 | 2 | CH_aly_164 | 3 | 3 | 0.00000143772 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 2 | CH_amhyb_75 | 3 | 4 | 0.00000357039 |
| Arabidopsis thaliana | Chr2 | 2 | CH_ath_239 | 3 | 12 | 0.0000446516 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 2 | CH_bvu_303 | 2 | 2 | 0.000827917 |
| Chara braunii | BFEA01000274 | 2 | CH_cbr_52 | 3 | 10 | 0.0000325613 |
| Erythranthe guttata | scaffold_14 | 2 | CH_egut_213 | 3 | 4 | 0.00000267176 |
| Gossypium hirsutum | D11 | 2 | CH_ghi_406 | 3 | 3 | 0.00000977392 |
| Gossypium hirsutum | A11 | 2 | CH_ghi_522 | 3 | 5 | 0.0000976662 |
| Lotus japonicus | chr1 | 2 | CH_lja_296 | 3 | 10 | 0.000202104 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 2 | CH_lsa_72 | 6 | 33 | 0.00000000000412454 |
| Magnolia biondii | Chr09 | 2 | CH_mbi_297 | 3 | 12 | 0.0000272194 |
| Marchantia polymorpha | scaffold_16 | 2 | CH_mpo_132 | 2 | 3 | 0.000993889 |
| Nelumbo nucifera | chr7 | 2 | CH_nnu_446 | 2 | 2 | 0.000654022 |
| Nicotiana tabacum | Nitab4.5_0000032 | 2 | CH_nta_79 | 3 | 7 | 0.0000353629 |
| Petunia axillaris | Peaxi162Scf00765 | 2 | CH_pax_140 | 4 | 16 | 0.00000450424 |
| Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_22 | 8 | 30 | 2.22851e-18 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_357 | 4 | 6 | 0.00000000171637 |
| Solanum tuberosum | ST4.03ch04 | 2 | CH_stu_211 | 4 | 14 | 0.000000403629 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |