Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.oxidative phosphorylation.cytochrome c reductase complex.Rieske iron-sulphur component UCR1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-3 1 CH_aar_162 2 2 0.0000912326
Arabidopsis lyrata scaffold_6 1 CH_aly_242 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 1 CH_arhy_227 3 4 0.000000107553
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 1 CH_arhy_228 3 4 0.000000107553
Arabidopsis thaliana Chr5 1 CH_ath_227 2 2 0.0000286492
Brassica carinata Contig655 1 CH_bca_1008 2 2 0.00059854
Brassica carinata Contig461 1 CH_bca_1009 2 2 0.00059854
Brassica carinata ChrC04 1 CH_bca_1010 2 2 0.00059854
Brassica carinata ChrB01 1 CH_bca_1011 2 2 0.00059854
Brassica oleracea C2 1 CH_bol_311 2 2 0.000196117
Brassica rapa A02 1 CH_bra_325 2 2 0.000429314
Brassica rapa A03 1 CH_bra_326 2 2 0.000429314
Cardamine hirsuta Chr6 1 CH_chi_252 2 2 0.0000691204
Carya illinoinensis Chr04 1 CH_cil_433 2 2 0.000185948
Cucumis melo chr09 1 CH_cme_192 2 2 0.0000667111
Capsella rubella scaffold_6 1 CH_cru_275 2 2 0.0000731154
Cucumis sativus L. chr5 1 CH_csa_213 2 2 0.0000834759
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_280 2 2 0.0000448722
Eutrema salsugineum scaffold_2 1 CH_esa_187 2 2 0.0000761499
Glycine max Gm02 1 CH_gma_387 2 2 0.000113867
Petunia axillaris Peaxi162Scf00842 1 CH_pax_212 2 2 0.0000703556
Sechium edule LG03 1 CH_sed_263 2 2 0.000214026
Aethionema arabicum LG-3 2 CH_aar_162 2 2 0.0000912326
Arabidopsis lyrata scaffold_6 2 CH_aly_242 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 2 CH_arhy_227 3 4 0.000000107553
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 2 CH_arhy_228 3 4 0.000000107553
Arabidopsis thaliana Chr5 2 CH_ath_227 2 2 0.0000286492
Brassica carinata Contig655 2 CH_bca_1008 2 2 0.00059854
Brassica carinata Contig461 2 CH_bca_1009 2 2 0.00059854
Brassica carinata ChrC04 2 CH_bca_1010 2 2 0.00059854
Brassica carinata ChrB01 2 CH_bca_1011 2 2 0.00059854
Brassica oleracea C2 2 CH_bol_311 2 2 0.000196117
Brassica rapa A02 2 CH_bra_325 2 2 0.000429314
Brassica rapa A03 2 CH_bra_326 2 2 0.000429314
Cardamine hirsuta Chr6 2 CH_chi_252 2 2 0.0000691204
Carya illinoinensis Chr04 2 CH_cil_433 2 2 0.000185948
Cucumis melo chr09 2 CH_cme_192 2 2 0.0000667111
Capsella rubella scaffold_6 2 CH_cru_275 2 2 0.0000731154
Cucumis sativus L. chr5 2 CH_csa_213 2 2 0.0000834759
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_280 2 2 0.0000448722
Eutrema salsugineum scaffold_2 2 CH_esa_187 2 2 0.0000761499
Glycine max Gm02 2 CH_gma_387 2 2 0.000113867
Petunia axillaris Peaxi162Scf00842 2 CH_pax_212 2 2 0.0000703556
Sechium edule LG03 2 CH_sed_263 2 2 0.000214026

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001