Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.tricarboxylic acid cycle.fumarase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC09 1 CH_bca_195 3 3 0.0000000239902
Capsella rubella scaffold_8 1 CH_cru_343 2 2 0.000219346
Davidia involucrata GWHABJS00000007 1 CH_din_374 2 2 0.000150038
Fragaria vesca Fvb2 1 CH_fve_283 2 2 0.0000589102
Glycine max Gm02 1 CH_gma_468 2 2 0.000227734
Lupinus albus Lalb_Chr02 1 CH_lal_338 2 3 0.000472321
Phaseolus vulgaris Chr07 1 CH_pvu_308 2 2 0.0000734727
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_498 2 2 0.0000398653
Solanum lycopersicum SL4.0ch06 1 CH_sly_137 3 3 0.0000000206706
Vigna mungo CM024071.1 1 CH_vmu_228 2 2 0.0000646141
Brassica carinata ChrC09 2 CH_bca_195 3 3 0.0000000239902
Capsella rubella scaffold_8 2 CH_cru_343 2 2 0.000219346
Davidia involucrata GWHABJS00000007 2 CH_din_374 2 2 0.000150038
Eucalyptus grandis Chr08 2 CH_egr_762 2 3 0.000175577
Fragaria vesca Fvb2 2 CH_fve_283 2 2 0.0000589102
Glycine max Gm02 2 CH_gma_468 2 2 0.000227734
Lupinus albus Lalb_Chr02 2 CH_lal_338 2 3 0.000472321
Phaseolus vulgaris Chr07 2 CH_pvu_308 2 2 0.0000734727
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_498 2 2 0.0000398653
Solanum lycopersicum SL4.0ch06 2 CH_sly_137 3 3 0.0000000206706
Vigna mungo CM024071.1 2 CH_vmu_228 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001