Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.tricarboxylic acid cycle.2-oxoglutarate dehydrogenase complex.component E1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 1 CH_arhy_640 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 1 CH_arhy_641 2 2 0.000449075
Coffea canephora chr2 1 CH_ccan_55 3 8 0.0000000015236
Davidia involucrata GWHABJS00000004 1 CH_din_355 2 2 0.000150038
Fragaria x ananassa Fvb7-4 1 CH_fan_241 3 9 0.00000362272
Fragaria vesca Fvb7 1 CH_fve_77 4 13 0.000000000438451
Gossypium raimondii Chr12 1 CH_gra_315 2 2 0.000160832
Malus domestica Chr02 1 CH_mdo_218 3 4 0.000000172554
Malus domestica Chr07 1 CH_mdo_692 2 2 0.000568817
Manihot esculenta Chromosome10 1 CH_mes_373 2 2 0.000183189
Prunus persica Pp02 1 CH_ppe_347 2 2 0.0000745962
Simmondsia chinensis GWHAASQ00000020 1 CH_sci_229 2 2 0.000255428
Theobroma cacao Chromosome_10 1 CH_tca_294 2 2 0.0000732386
Vanilla planifolia CM028155.1 1 CH_vpl_267 2 2 0.000221664
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 2 CH_arhy_640 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 2 CH_arhy_641 2 2 0.000449075
Coffea canephora chr2 2 CH_ccan_55 3 8 0.0000000015236
Davidia involucrata GWHABJS00000004 2 CH_din_355 2 2 0.000150038
Fragaria x ananassa Fvb7-4 2 CH_fan_241 3 9 0.00000362272
Fragaria vesca Fvb7 2 CH_fve_77 4 13 0.000000000438451
Gossypium hirsutum A05 2 CH_ghi_712 2 2 0.000400523
Gossypium hirsutum D04 2 CH_ghi_713 2 2 0.000400523
Gossypium raimondii Chr12 2 CH_gra_315 2 2 0.000160832
Malus domestica Chr02 2 CH_mdo_218 3 4 0.000000172554
Malus domestica Chr07 2 CH_mdo_692 2 2 0.000568817
Manihot esculenta Chromosome10 2 CH_mes_373 2 2 0.000183189
Prunus persica Pp02 2 CH_ppe_347 2 2 0.0000745962
Simmondsia chinensis GWHAASQ00000020 2 CH_sci_229 2 2 0.000255428
Theobroma cacao Chromosome_10 2 CH_tca_294 2 2 0.0000732386
Vanilla planifolia CM028155.1 2 CH_vpl_267 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001