Functional clusters
Information
- Type MapMan
- Description Cellular respiration.glycolysis.methylglyoxal degradation.lactoyl-glutathione lyase (GLX1)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 1 | CH_amhyb_207 | 2 | 2 | 0.000252525 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 1 | CH_arhy_78 | 7 | 40 | 0.000000000000032574 |
| Camellia sinensis var. sinensis | Chr11 | 1 | CH_camsi_353 | 3 | 4 | 0.00000105963 |
| Chara braunii | BFEA01000135 | 1 | CH_cbr_123 | 2 | 4 | 0.00043153 |
| Citrus clementina | scaffold_2 | 1 | CH_ccl_491 | 2 | 2 | 0.000820311 |
| Ceratophyllum demersum | 3 | 1 | CH_cde_280 | 2 | 2 | 0.000789796 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 1 | CH_eca_486 | 2 | 2 | 0.000673083 |
| Gossypium hirsutum | D03 | 1 | CH_ghi_145 | 4 | 4 | 0.000000000341832 |
| Gossypium hirsutum | A03 | 1 | CH_ghi_329 | 3 | 3 | 0.0000014224 |
| Gossypium raimondii | Chr03 | 1 | CH_gra_81 | 4 | 4 | 0.000000000152554 |
| Marchantia polymorpha | scaffold_33 | 1 | CH_mpo_131 | 2 | 3 | 0.000993889 |
| Rhododendron simsii | chr13 | 1 | CH_rsi_185 | 3 | 3 | 0.00000012493 |
| Sequoiadendron giganteum | chr9 | 1 | CH_sgi_1126 | 2 | 2 | 0.000146145 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_145 | 4 | 24 | 0.00000178376 |
| Zea mays | 5 | 1 | CH_zma_258 | 2 | 2 | 0.000511313 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 2 | CH_amhyb_207 | 2 | 2 | 0.000252525 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 2 | CH_arhy_78 | 7 | 40 | 0.000000000000032574 |
| Camellia sinensis var. sinensis | Chr11 | 2 | CH_camsi_353 | 3 | 4 | 0.00000105963 |
| Chara braunii | BFEA01000135 | 2 | CH_cbr_123 | 2 | 4 | 0.00043153 |
| Citrus clementina | scaffold_2 | 2 | CH_ccl_491 | 2 | 2 | 0.000820311 |
| Ceratophyllum demersum | 3 | 2 | CH_cde_280 | 2 | 2 | 0.000789796 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 2 | CH_eca_486 | 2 | 2 | 0.000673083 |
| Eucalyptus grandis | Chr06 | 2 | CH_egr_465 | 3 | 3 | 0.000000179842 |
| Gossypium hirsutum | D03 | 2 | CH_ghi_145 | 4 | 4 | 0.000000000341832 |
| Gossypium hirsutum | A03 | 2 | CH_ghi_329 | 3 | 3 | 0.0000014224 |
| Gossypium raimondii | Chr03 | 2 | CH_gra_81 | 4 | 4 | 0.000000000152554 |
| Marchantia polymorpha | scaffold_33 | 2 | CH_mpo_131 | 2 | 3 | 0.000993889 |
| Rhododendron simsii | chr13 | 2 | CH_rsi_185 | 3 | 3 | 0.00000012493 |
| Sequoiadendron giganteum | chr9 | 2 | CH_sgi_1126 | 2 | 2 | 0.000146145 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_145 | 4 | 24 | 0.00000178376 |
| Zea mays | 5 | 2 | CH_zma_258 | 2 | 2 | 0.000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |