Functional clusters

Information

  • Type MapMan
  • Description Cellular respiration.glycolysis.cytosolic glycolysis.fructose-bisphosphate aldolase (FBA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 1 CH_bca_240 3 3 0.000000113097
Brassica oleracea C4 1 CH_bol_414 2 2 0.000686409
Brassica rapa A04 1 CH_bra_385 2 2 0.000901558
Cannabis sativa NC_044372.1 1 CH_cansat_304 2 2 0.000196993
Chara braunii BFEA01000381 1 CH_cbr_45 4 30 0.0000100347
Chara braunii BFEA01000372 1 CH_cbr_48 3 5 0.0000127984
Capsella rubella scaffold_7 1 CH_cru_424 2 2 0.000731154
Gossypium raimondii Chr09 1 CH_gra_363 2 2 0.000321664
Prunus persica Pp07 1 CH_ppe_464 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_602 2 2 0.000119596
Brassica carinata ChrB06 2 CH_bca_240 3 3 0.000000113097
Brassica oleracea C4 2 CH_bol_414 2 2 0.000686409
Brassica rapa A04 2 CH_bra_385 2 2 0.000901558
Cannabis sativa NC_044372.1 2 CH_cansat_304 2 2 0.000196993
Chara braunii BFEA01000381 2 CH_cbr_45 4 30 0.0000100347
Chara braunii BFEA01000372 2 CH_cbr_48 3 5 0.0000127984
Capsella rubella scaffold_7 2 CH_cru_424 2 2 0.000731154
Gossypium hirsutum D04 2 CH_ghi_841 2 2 0.000747644
Gossypium raimondii Chr09 2 CH_gra_363 2 2 0.000321664
Prunus persica Pp07 2 CH_ppe_464 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_602 2 2 0.000119596

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001