Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related protein kinase (SnRK3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr4 1 CH_camsi_309 4 8 0.000000354736
Camellia sinensis var. sinensis Chr8 1 CH_camsi_444 3 3 0.00000922562
Coffea canephora chr6 1 CH_ccan_348 2 3 0.000651613
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_246 3 4 0.0000313987
Eutrema salsugineum scaffold_2 1 CH_esa_340 3 7 0.000994377
Olea europaea scaffold998 1 CH_oeu_117 3 3 0.00000865072
Papaver somniferum NC_039362.1 1 CH_pso_377 4 20 0.000015097
Papaver somniferum NC_039360.1 1 CH_pso_554 3 7 0.000262798
Quercus lobata CM012294 1 CH_qlo_595 3 4 0.0000154927
Solanum lycopersicum SL4.0ch06 1 CH_sly_163 4 6 0.00000015952
Trochodendron aralioides group1 1 CH_tar_290 3 4 0.0000708081
Trifolium pratense Tp57577_TGAC_v2_scaf_164 1 CH_tpr_336 3 8 0.000269006
Camellia sinensis var. sinensis Chr4 2 CH_camsi_309 4 8 0.000000354736
Camellia sinensis var. sinensis Chr8 2 CH_camsi_444 3 3 0.00000922562
Coffea canephora chr6 2 CH_ccan_348 2 3 0.000651613
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_246 3 4 0.0000313987
Eutrema salsugineum scaffold_2 2 CH_esa_340 3 7 0.000994377
Olea europaea scaffold998 2 CH_oeu_117 3 3 0.00000865072
Papaver somniferum NC_039362.1 2 CH_pso_377 4 20 0.000015097
Papaver somniferum NC_039360.1 2 CH_pso_554 3 7 0.000262798
Quercus lobata CM012294 2 CH_qlo_595 3 4 0.0000154927
Solanum lycopersicum SL4.0ch06 2 CH_sly_163 4 6 0.00000015952
Trochodendron aralioides group1 2 CH_tar_290 3 4 0.0000708081
Trifolium pratense Tp57577_TGAC_v2_scaf_164 2 CH_tpr_336 3 8 0.000269006

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001