Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.CAMK protein kinase superfamily.SNF1-related SnRK1 kinase complex.catalytic subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_295 2 2 0.000070497
Arabidopsis lyrata scaffold_7 1 CH_aly_361 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 1 CH_arhy_633 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 1 CH_arhy_634 2 2 0.000449075
Cannabis sativa NC_044379.1 1 CH_cansat_219 2 2 0.0000656642
Carpinus fangiana Cfa03 1 CH_cfa_296 2 3 0.000227204
Capsella rubella scaffold_7 1 CH_cru_365 2 2 0.000438693
Glycine max Gm08 1 CH_gma_433 2 2 0.000227734
Punica granatum NC_045133.1 1 CH_pgr_278 2 2 0.000225107
Phaseolus vulgaris Chr08 1 CH_pvu_350 2 2 0.000220418
Selenicereus undatus Scaffold_33677 1 CH_sun_228 2 4 0.000435951
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_306 2 2 0.000227092
Vigna mungo CM024070.1 1 CH_vmu_283 2 2 0.000193842
Acer truncatum chr8 2 CH_acertr_295 2 2 0.000070497
Arabidopsis lyrata scaffold_7 2 CH_aly_361 2 2 0.000396027
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 2 CH_arhy_633 2 2 0.000449075
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 2 CH_arhy_634 2 2 0.000449075
Cannabis sativa NC_044379.1 2 CH_cansat_219 2 2 0.0000656642
Carpinus fangiana Cfa03 2 CH_cfa_296 2 3 0.000227204
Capsella rubella scaffold_7 2 CH_cru_365 2 2 0.000438693
Eucalyptus grandis Chr02 2 CH_egr_875 2 3 0.000526721
Glycine max Gm08 2 CH_gma_433 2 2 0.000227734
Punica granatum NC_045133.1 2 CH_pgr_278 2 2 0.000225107
Phaseolus vulgaris Chr08 2 CH_pvu_350 2 2 0.000220418
Selenicereus undatus Scaffold_33677 2 CH_sun_228 2 4 0.000435951
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_306 2 2 0.000227092
Vigna mungo CM024070.1 2 CH_vmu_283 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001