Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.CMGC protein kinase superfamily.protein kinase (MAPK)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00001 1 CH_atr_340 3 20 0.000903162
Brassica carinata ChrC07 1 CH_bca_265 6 59 0.000000178504
Brassica carinata ChrB02 1 CH_bca_660 3 4 0.0000845609
Lotus japonicus chr4 1 CH_lja_95 4 5 0.000000021251
Medicago truncatula chr3 1 CH_mtr_468 4 26 0.000018496
Punica granatum NC_045129.1 1 CH_pgr_110 6 59 0.000000127345
Amborella trichopoda AmTr_v1.0_scaffold00001 2 CH_atr_340 3 20 0.000903162
Brassica carinata ChrC07 2 CH_bca_265 6 59 0.000000178504
Brassica carinata ChrB02 2 CH_bca_660 3 4 0.0000845609
Lotus japonicus chr4 2 CH_lja_95 4 5 0.000000021251
Punica granatum NC_045129.1 2 CH_pgr_110 6 59 0.000000127345

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001