Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein aspartate phosphatase superfamily.FCP phosphatase families.subcluster I phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_138 3 3 0.0000001491
Arabidopsis thaliana Chr2 1 CH_ath_308 2 2 0.000171895
Brassica carinata ChrB06 1 CH_bca_567 3 15 0.0000373948
Camellia sinensis var. sinensis Chr15 1 CH_camsi_931 2 3 0.000825341
Corylus avellana 10 1 CH_cav_351 2 2 0.000230008
Citrus clementina scaffold_6 1 CH_ccl_444 2 2 0.000492187
Carpinus fangiana Cfa07 1 CH_cfa_102 3 3 0.0000000860393
Cardamine hirsuta Chr4 1 CH_chi_356 2 2 0.000414723
Carica papaya supercontig_5 1 CH_cpa_82 3 4 0.000000542215
Capsella rubella scaffold_4 1 CH_cru_363 2 2 0.000438693
Fragaria x ananassa Fvb6-2 1 CH_fan_163 3 3 0.000000287605
Fragaria vesca Fvb6 1 CH_fve_452 2 2 0.000589102
Helianthus annuus HanXRQChr11 1 CH_han_272 3 3 0.000000492789
Helianthus annuus HanXRQChr16 1 CH_han_359 4 41 0.00000863261
Lactuca sativa Lsat_1_v8_lg_1 1 CH_lsa_175 3 3 0.0000000792629
Magnolia biondii Chr01 1 CH_mbi_170 3 8 0.000000198109
Malus domestica Chr14 1 CH_mdo_194 3 3 0.0000000754972
Medicago truncatula chr7 1 CH_mtr_548 3 12 0.0000467471
Medicago truncatula chr7 1 CH_mtr_87 5 6 0.000000000000016158
Olea europaea chr20 1 CH_oeu_81 3 3 0.000000512889
Oryza sativa ssp. japonica chr03 1 CH_osa_395 2 4 0.000950537
Petunia axillaris Peaxi162Scf00991 1 CH_pax_333 2 3 0.000633164
Papaver somniferum NC_039364.1 1 CH_pso_693 2 4 0.000810796
Populus trichocarpa Chr10 1 CH_ptr_430 2 2 0.000346801
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_361 4 44 0.00000180018
Rhododendron simsii chr03 1 CH_rsi_558 2 2 0.000645307
Salix brachista GWHAAZH00000015 1 CH_sbr_413 2 2 0.000945209
Sequoiadendron giganteum chr2 1 CH_sgi_221 4 4 0.000000000000346852
Solanum lycopersicum SL4.0ch09 1 CH_sly_517 2 2 0.000586941
Solanum tuberosum ST4.03ch09 1 CH_stu_562 2 2 0.000512453
Trochodendron aralioides group18 1 CH_tar_158 3 5 0.000000540594
Tarenaya hassleriana NW_010966881.1 1 CH_tha_173 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_86 3 3 0.0000000859546
Vaccinium macrocarpon scaffold00230_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_418 2 2 0.000929238
Vigna mungo CM024070.1 1 CH_vmu_389 2 2 0.000646141
Acer truncatum chr8 2 CH_acertr_138 3 3 0.0000001491
Arabidopsis thaliana Chr2 2 CH_ath_308 2 2 0.000171895
Brassica carinata ChrB06 2 CH_bca_567 3 15 0.0000373948
Camellia sinensis var. sinensis Chr15 2 CH_camsi_931 2 3 0.000825341
Corylus avellana 10 2 CH_cav_351 2 2 0.000230008
Citrus clementina scaffold_6 2 CH_ccl_444 2 2 0.000492187
Carpinus fangiana Cfa07 2 CH_cfa_102 3 3 0.0000000860393
Cardamine hirsuta Chr4 2 CH_chi_356 2 2 0.000414723
Carica papaya supercontig_5 2 CH_cpa_82 3 4 0.000000542215
Capsella rubella scaffold_4 2 CH_cru_363 2 2 0.000438693
Eucalyptus grandis Chr02 2 CH_egr_773 2 2 0.000175582
Fragaria x ananassa Fvb6-2 2 CH_fan_163 3 3 0.000000287605
Fragaria vesca Fvb6 2 CH_fve_452 2 2 0.000589102
Helianthus annuus HanXRQChr11 2 CH_han_272 3 3 0.000000492789
Helianthus annuus HanXRQChr16 2 CH_han_359 4 41 0.00000863261
Lactuca sativa Lsat_1_v8_lg_1 2 CH_lsa_175 3 3 0.0000000792629
Magnolia biondii Chr01 2 CH_mbi_170 3 8 0.000000198109
Malus domestica Chr14 2 CH_mdo_194 3 3 0.0000000754972
Olea europaea chr20 2 CH_oeu_81 3 3 0.000000512889
Oryza sativa ssp. japonica chr03 2 CH_osa_395 2 4 0.000950537
Petunia axillaris Peaxi162Scf00991 2 CH_pax_333 2 3 0.000633164
Papaver somniferum NC_039364.1 2 CH_pso_693 2 4 0.000810796
Populus trichocarpa Chr10 2 CH_ptr_430 2 2 0.000346801
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_361 4 44 0.00000180018
Rhododendron simsii chr03 2 CH_rsi_558 2 2 0.000645307
Salix brachista GWHAAZH00000015 2 CH_sbr_413 2 2 0.000945209
Sequoiadendron giganteum chr2 2 CH_sgi_221 4 4 0.000000000000346852
Solanum lycopersicum SL4.0ch09 2 CH_sly_517 2 2 0.000586941
Solanum tuberosum ST4.03ch09 2 CH_stu_562 2 2 0.000512453
Trochodendron aralioides group18 2 CH_tar_158 3 5 0.000000540594
Tarenaya hassleriana NW_010966881.1 2 CH_tha_173 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_86 3 3 0.0000000859546
Vaccinium macrocarpon scaffold00230_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_418 2 2 0.000929238
Vigna mungo CM024070.1 2 CH_vmu_389 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001