Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade E phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr2_EL10_PGA_scaffold6 1 CH_bvu_106 3 3 0.000000575799
Chenopodium quinoa C_Quinoa_Scaffold_4319 1 CH_cqu_229 3 3 0.0000018859
Chenopodium quinoa C_Quinoa_Scaffold_3674 1 CH_cqu_89 4 4 0.000000000580855
Petunia axillaris Peaxi162Scf00436 1 CH_pax_114 3 3 0.000000623712
Physcomitrium patens Chr14 1 CH_ppa_228 2 2 0.000367636
Papaver somniferum NC_039359.1 1 CH_pso_230 4 9 0.0000000757189
Papaver somniferum NC_039359.1 1 CH_pso_252 4 10 0.000000126171
Solanum pennellii Spenn-ch08 1 CH_spe_206 4 28 0.00000538502
Beta vulgaris Chr2_EL10_PGA_scaffold6 2 CH_bvu_106 3 3 0.000000575799
Chenopodium quinoa C_Quinoa_Scaffold_4319 2 CH_cqu_229 3 3 0.0000018859
Chenopodium quinoa C_Quinoa_Scaffold_3674 2 CH_cqu_89 4 4 0.000000000580855
Petunia axillaris Peaxi162Scf00436 2 CH_pax_114 3 3 0.000000623712
Physcomitrium patens Chr14 2 CH_ppa_228 2 2 0.000367636
Papaver somniferum NC_039359.1 2 CH_pso_230 4 9 0.0000000757189
Papaver somniferum NC_039359.1 2 CH_pso_252 4 10 0.000000126171
Solanum pennellii Spenn-ch08 2 CH_spe_206 4 28 0.00000538502

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001