Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade D phosphatase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cicer arietinum L. | Ca_LG3_v3 | 1 | CH_car_89 | 3 | 3 | 0.00000330754 |
| Medicago truncatula | chr3 | 1 | CH_mtr_435 | 3 | 5 | 0.00000921364 |
| Pisum sativum | chr3LG5 | 1 | CH_psa_48 | 4 | 4 | 0.000000000426274 |
| Solanum lycopersicum | SL4.0ch10 | 1 | CH_sly_213 | 3 | 3 | 0.00000188102 |
| Solanum pennellii | Spenn-ch10 | 1 | CH_spe_40 | 5 | 5 | 0.00000000000012824 |
| Solanum tuberosum | ST4.03ch10 | 1 | CH_stu_118 | 4 | 5 | 0.00000000275492 |
| Zea mays | 1 | 1 | CH_zma_94 | 3 | 3 | 0.00000112161 |
| Cicer arietinum L. | Ca_LG3_v3 | 2 | CH_car_89 | 3 | 3 | 0.00000330754 |
| Pisum sativum | chr3LG5 | 2 | CH_psa_48 | 4 | 4 | 0.000000000426274 |
| Solanum lycopersicum | SL4.0ch10 | 2 | CH_sly_213 | 3 | 3 | 0.00000188102 |
| Solanum pennellii | Spenn-ch10 | 2 | CH_spe_40 | 5 | 5 | 0.00000000000012824 |
| Solanum tuberosum | ST4.03ch10 | 2 | CH_stu_118 | 4 | 5 | 0.00000000275492 |
| Zea mays | 1 | 2 | CH_zma_94 | 3 | 3 | 0.00000112161 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |