Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade B phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr7 1 CH_camsi_977 2 2 0.000962949
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_477 2 2 0.000673083
Helianthus annuus HanXRQChr07 1 CH_han_371 3 9 0.0000105309
Magnolia biondii Chr15 1 CH_mbi_240 3 8 0.00000396109
Rhododendron simsii chr09 1 CH_rsi_198 3 3 0.000000218628
Sequoiadendron giganteum chr7 1 CH_sgi_463 4 13 0.000000017344
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_417 2 2 0.000929238
Camellia sinensis var. sinensis Chr7 2 CH_camsi_977 2 2 0.000962949
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_477 2 2 0.000673083
Helianthus annuus HanXRQChr07 2 CH_han_371 3 9 0.0000105309
Magnolia biondii Chr15 2 CH_mbi_240 3 8 0.00000396109
Rhododendron simsii chr09 2 CH_rsi_198 3 3 0.000000218628
Sequoiadendron giganteum chr7 2 CH_sgi_463 4 13 0.000000017344
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_417 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001