Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.Shewanella-like phosphatase (SLP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_416 2 2 0.000211491
Carica papaya supercontig_9 1 CH_cpa_366 2 3 0.000855527
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_549 2 3 0.000925157
Physcomitrium patens Chr16 1 CH_ppa_227 2 2 0.000367636
Quercus lobata 10 1 CH_qlo_937 2 3 0.00046464
Sequoiadendron giganteum chr1 1 CH_sgi_832 2 2 0.0000487151
Tripterygium wilfordii NC_052240.1 1 CH_twi_244 2 2 0.000334504
Acer truncatum chr3 2 CH_acertr_416 2 2 0.000211491
Carica papaya supercontig_9 2 CH_cpa_366 2 3 0.000855527
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_549 2 3 0.000925157
Physcomitrium patens Chr16 2 CH_ppa_227 2 2 0.000367636
Quercus lobata 10 2 CH_qlo_937 2 3 0.00046464
Sequoiadendron giganteum chr1 2 CH_sgi_832 2 2 0.0000487151
Tripterygium wilfordii NC_052240.1 2 CH_twi_244 2 2 0.000334504

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001