Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL-class phosphatase (BSU/BSL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_691 2 2 0.000628705
Amborella trichopoda AmTr_v1.0_scaffold00004 1 CH_atr_278 2 4 0.000476607
Camellia sinensis var. sinensis Chr13 1 CH_camsi_820 2 2 0.000458547
Carica papaya supercontig_103 1 CH_cpa_365 2 3 0.000855527
Erythranthe guttata scaffold_4 1 CH_egut_427 2 2 0.000436888
Lupinus albus Lalb_Chr02 1 CH_lal_351 2 2 0.000524824
Physcomitrium patens Chr01 1 CH_ppa_327 2 2 0.000919089
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_363 2 2 0.000557543
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_691 2 2 0.000628705
Amborella trichopoda AmTr_v1.0_scaffold00004 2 CH_atr_278 2 4 0.000476607
Camellia sinensis var. sinensis Chr13 2 CH_camsi_820 2 2 0.000458547
Carica papaya supercontig_103 2 CH_cpa_365 2 3 0.000855527
Erythranthe guttata scaffold_4 2 CH_egut_427 2 2 0.000436888
Lupinus albus Lalb_Chr02 2 CH_lal_351 2 2 0.000524824
Physcomitrium patens Chr01 2 CH_ppa_327 2 2 0.000919089
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_363 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001