Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4-class phosphatase complex.regulatory component PP4R3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold197 1 CH_can_331 2 2 0.000247831
Carica papaya supercontig_9 1 CH_cpa_165 2 2 0.0000950661
Fragaria x ananassa Fvb4-3 1 CH_fan_117 3 4 0.0000000410852
Nicotiana tabacum Nitab4.5_0002150 1 CH_nta_133 2 2 0.000329182
Salvia bowleyana GWHASIU00000004 1 CH_sbo_479 2 7 0.000955349
Sequoiadendron giganteum chr6 1 CH_sgi_755 2 2 0.0000487151
Solanum lycopersicum SL4.0ch01 1 CH_sly_397 2 2 0.000176082
Capsicum annuum PGAv.1.6.scaffold197 2 CH_can_331 2 2 0.000247831
Carica papaya supercontig_9 2 CH_cpa_165 2 2 0.0000950661
Fragaria x ananassa Fvb4-3 2 CH_fan_117 3 4 0.0000000410852
Nicotiana tabacum Nitab4.5_0002150 2 CH_nta_133 2 2 0.000329182
Salvia bowleyana GWHASIU00000004 2 CH_sbo_479 2 7 0.000955349
Sequoiadendron giganteum chr6 2 CH_sgi_755 2 2 0.0000487151
Solanum lycopersicum SL4.0ch01 2 CH_sly_397 2 2 0.000176082

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001