Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A-class phosphatase complexes.regulatory component B2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr6 1 CH_chi_142 3 4 0.000000573272
Eutrema salsugineum scaffold_6 1 CH_esa_315 2 2 0.000761499
Punica granatum NC_045128.1 1 CH_pgr_268 2 2 0.000225107
Papaver somniferum NC_039359.1 1 CH_pso_668 2 3 0.000675676
Sequoiadendron giganteum chr9 1 CH_sgi_1205 2 2 0.000292291
Schrenkiella parvula ch2-4 1 CH_spa_283 2 2 0.00078734
Vanilla planifolia CM028150.1 1 CH_vpl_380 3 39 0.000745948
Cardamine hirsuta Chr6 2 CH_chi_142 3 4 0.000000573272
Eutrema salsugineum scaffold_6 2 CH_esa_315 2 2 0.000761499
Punica granatum NC_045128.1 2 CH_pgr_268 2 2 0.000225107
Papaver somniferum NC_039359.1 2 CH_pso_668 2 3 0.000675676
Sequoiadendron giganteum chr9 2 CH_sgi_1205 2 2 0.000292291
Schrenkiella parvula ch2-4 2 CH_spa_283 2 2 0.00078734
Vanilla planifolia CM028150.1 2 CH_vpl_380 3 39 0.000745948

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001