Functional clusters
Information
- Type MapMan
- Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (MAP3K-RAF)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr3 | 1 | CH_ath_248 | 3 | 4 | 0.0000747218 |
| Brassica carinata | ChrB08 | 1 | CH_bca_729 | 3 | 3 | 0.000139936 |
| Chlamydomonas reinhardtii | chromosome_1 | 1 | CH_cre_14 | 4 | 5 | 0.00000102212 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 1 | CH_lsa_312 | 4 | 9 | 0.0000303908 |
| Medicago truncatula | chr4 | 1 | CH_mtr_494 | 3 | 3 | 0.0000410593 |
| Papaver somniferum | NC_039360.1 | 1 | CH_pso_100 | 7 | 16 | 0.00000000000325047 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_272 | 4 | 5 | 0.000000154982 |
| Schrenkiella parvula | ch3-1 | 1 | CH_spa_270 | 3 | 4 | 0.000563891 |
| Arabidopsis thaliana | Chr3 | 2 | CH_ath_248 | 3 | 4 | 0.0000747218 |
| Brassica carinata | ChrB08 | 2 | CH_bca_729 | 3 | 3 | 0.000139936 |
| Chlamydomonas reinhardtii | chromosome_1 | 2 | CH_cre_14 | 4 | 5 | 0.00000102212 |
| Eucalyptus grandis | Chr02 | 2 | CH_egr_593 | 4 | 10 | 0.0000114837 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 2 | CH_lsa_312 | 4 | 9 | 0.0000303908 |
| Papaver somniferum | NC_039360.1 | 2 | CH_pso_100 | 7 | 16 | 0.00000000000325047 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_272 | 4 | 5 | 0.000000154982 |
| Schrenkiella parvula | ch3-1 | 2 | CH_spa_270 | 3 | 4 | 0.000563891 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |