Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (L-lectin)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_520 3 9 0.000605141
Acer truncatum chr3 1 CH_acertr_58 5 9 0.000000000270979
Actinidia chinensis Lachesis_group5 1 CH_ach_27 4 4 0.0000000251806
Arabidopsis lyrata scaffold_4 1 CH_aly_131 4 4 0.000000252634
Arabidopsis lyrata scaffold_5 1 CH_aly_156 4 5 0.00000126149
Arabidopsis lyrata scaffold_6 1 CH_aly_273 3 3 0.000153091
Arabidopsis lyrata scaffold_4 1 CH_aly_274 3 3 0.000153091
Arabidopsis lyrata scaffold_6 1 CH_aly_399 3 4 0.000611586
Arabidopsis lyrata scaffold_8 1 CH_aly_56 5 5 0.000000000408577
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 1 CH_amhyb_5 7 8 1.12936e-17
Aquilegia oxysepala CHR06 1 CH_aox_25 5 6 0.0000000000288535
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 1 CH_arhy_102 6 9 0.000000000000425175
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_158 5 8 0.000000000461819
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 1 CH_arhy_396 3 3 0.0000204091
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_397 3 3 0.0000204091
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 1 CH_arhy_398 3 3 0.0000204091
Arabidopsis thaliana Chr3 1 CH_ath_199 4 13 0.0000115601
Arabidopsis thaliana Chr5 1 CH_ath_285 3 4 0.0000964745
Arabidopsis thaliana Chr3 1 CH_ath_48 6 16 0.0000000000549622
Arabidopsis thaliana Chr5 1 CH_ath_57 5 7 0.000000000224579
Amborella trichopoda AmTr_v1.0_scaffold00046 1 CH_atr_101 4 5 0.000000393393
Amborella trichopoda AmTr_v1.0_scaffold00049 1 CH_atr_153 3 3 0.000061959
Amborella trichopoda AmTr_v1.0_scaffold00012 1 CH_atr_3 16 23 2.01053e-38
Brassica carinata ChrC04 1 CH_bca_11 10 19 9.88332e-19
Brassica carinata ChrB08 1 CH_bca_13 9 13 4.93671e-18
Brassica carinata ChrC01 1 CH_bca_406 4 5 0.00000338471
Brassica carinata ChrB05 1 CH_bca_407 4 5 0.00000338471
Brassica carinata ChrB01 1 CH_bca_477 4 6 0.0000101409
Brassica carinata ChrB01 1 CH_bca_902 3 3 0.000417214
Brassica napus C03 1 CH_bna_246 4 4 0.00000046659
Brassica napus C03 1 CH_bna_303 4 5 0.00000233028
Brassica napus C09 1 CH_bna_304 4 5 0.00000233028
Brassica napus A06 1 CH_bna_400 4 7 0.0000162747
Brassica napus A10 1 CH_bna_5 10 16 2.74462e-20
Brassica napus C09 1 CH_bna_8 10 20 6.30065e-19
Brassica oleracea C3 1 CH_bol_137 4 5 0.000000786295
Brassica oleracea C9 1 CH_bol_17 10 27 3.60617e-18
Brassica oleracea C2 1 CH_bol_257 4 12 0.0000773016
Brassica rapa A06 1 CH_bra_119 4 5 0.00000115196
Brassica rapa A06 1 CH_bra_248 3 3 0.000158017
Brassica rapa A10 1 CH_bra_5 10 13 4.62361e-22
Beta vulgaris Chr7_EL10_PGA_scaffold5 1 CH_bvu_20 6 6 0.00000000000000237563
Camellia sinensis var. sinensis Chr10 1 CH_camsi_117 6 10 0.0000000000246501
Camellia sinensis var. sinensis Chr1 1 CH_camsi_134 5 5 0.000000000104879
Camellia sinensis var. sinensis Chr4 1 CH_camsi_219 5 9 0.0000000131642
Camellia sinensis var. sinensis Chr4 1 CH_camsi_28 11 35 6.2642e-20
Camellia sinensis var. sinensis Chr13 1 CH_camsi_53 11 71 0.00000000000000472127
Cannabis sativa NC_044371.1 1 CH_cansat_131 4 7 0.000000375445
Cannabis sativa NC_044370.1 1 CH_cansat_158 4 10 0.00000224872
Cannabis sativa NC_044373.1 1 CH_cansat_354 3 7 0.00051947
Cicer arietinum L. Ca_LG3_v3 1 CH_car_190 3 5 0.000120716
Cicer arietinum L. Ca_LG6_v3 1 CH_car_36 4 5 0.000000042306
Corylus avellana 9 1 CH_cav_160 6 34 0.00000248398
Corylus avellana 10 1 CH_cav_43 6 8 0.000000000054028
Corylus avellana 11 1 CH_cav_44 6 8 0.000000000054028
Corylus avellana 2 1 CH_cav_47 6 9 0.000000000161812
Corylus avellana 2 1 CH_cav_51 6 10 0.000000000403849
Corylus avellana 6 1 CH_cav_52 6 10 0.000000000403849
Coffea canephora chr0 1 CH_ccan_171 4 78 0.0000152704
Coffea canephora chr3 1 CH_ccan_364 3 31 0.000730772
Coffea canephora chr0 1 CH_ccan_367 3 32 0.000806328
Citrus clementina scaffold_8 1 CH_ccl_209 4 9 0.00000310788
Citrus clementina scaffold_7 1 CH_ccl_348 3 4 0.0001049
Ceratophyllum demersum 1 1 CH_cde_42 4 7 0.000000548631
Ceratophyllum demersum 7 1 CH_cde_63 3 3 0.0000189386
Carpinus fangiana Cfa02 1 CH_cfa_129 4 6 0.00000070177
Carpinus fangiana Cfa01 1 CH_cfa_15 9 11 2.36539e-21
Carpinus fangiana Cfa02 1 CH_cfa_200 3 3 0.0000426755
Cardamine hirsuta NSCAFA.214I 1 CH_chi_326 3 3 0.000221136
Cardamine hirsuta Chr2 1 CH_chi_327 3 3 0.000221136
Cardamine hirsuta Chr6 1 CH_chi_328 3 3 0.000221136
Cardamine hirsuta Chr5 1 CH_chi_38 9 26 0.0000000000000239533
Cardamine hirsuta Chr8 1 CH_chi_72 5 5 0.000000000784591
Carya illinoinensis Chr01 1 CH_cil_100 6 6 0.000000000002949
Carya illinoinensis Chr10 1 CH_cil_159 5 5 0.00000000144157
Carya illinoinensis Chr10 1 CH_cil_224 5 9 0.00000018038
Carya illinoinensis Chr07 1 CH_cil_237 5 10 0.000000360134
Carya illinoinensis Chr13 1 CH_cil_246 4 4 0.000000694191
Carya illinoinensis Chr09 1 CH_cil_266 5 13 0.0000018297
Carya illinoinensis Chr06 1 CH_cil_29 10 12 2.90963e-21
Carya illinoinensis Chr05 1 CH_cil_456 3 3 0.000329383
Citrullus lanatus CG_Chr09 1 CH_cla_72 6 69 0.00000143279
Cucumis melo chr04 1 CH_cme_136 3 3 0.0000153543
Cucumis melo chr11 1 CH_cme_60 5 10 0.00000000198336
Carica papaya supercontig_129 1 CH_cpa_108 3 3 0.0000038773
Chenopodium quinoa C_Quinoa_Scaffold_2465 1 CH_cqu_3 13 13 9.2858e-35
Chenopodium quinoa C_Quinoa_Scaffold_2751 1 CH_cqu_404 3 4 0.000280282
Chenopodium quinoa C_Quinoa_Scaffold_1337 1 CH_cqu_64 6 11 0.0000000000445107
Chenopodium quinoa C_Quinoa_Scaffold_2716 1 CH_cqu_71 5 5 0.0000000000888128
Capsella rubella scaffold_5 1 CH_cru_176 4 5 0.00000113943
Capsella rubella scaffold_6 1 CH_cru_293 3 3 0.000138698
Capsella rubella scaffold_8 1 CH_cru_73 5 5 0.000000000367091
Capsella rubella scaffold_5 1 CH_cru_92 5 7 0.00000000768817
Cucumis sativus L. chr2 1 CH_csa_158 4 10 0.00000746629
Cucumis sativus L. chr3 1 CH_csa_179 3 3 0.0000342433
Cucumis sativus L. chr7 1 CH_csa_234 3 4 0.00013686
Daucus carota DCARv2_Chr1 1 CH_dca_260 3 5 0.0000938726
Davidia involucrata GWHABJS00000021 1 CH_din_105 4 4 0.0000000277035
Davidia involucrata GWHABJS00000015 1 CH_din_229 3 3 0.0000316516
Davidia involucrata GWHABJS00000007 1 CH_din_484 3 6 0.000631739
Durio zibethinus NW_019167937.1 1 CH_dzi_185 3 3 0.0000397677
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_24 9 28 5.82483e-16
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_301 3 3 0.0000667496
Erigeron canadensis Conyza_canadensis_scaffold:6 1 CH_eca_63 5 5 0.0000000000790369
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_74 6 18 0.00000000153058
Erigeron canadensis Conyza_canadensis_scaffold:5 1 CH_eca_8 10 21 2.89116e-20
Eucalyptus grandis Chr08 1 CH_egr_107 10 14 1.47869e-18
Eucalyptus grandis Chr11 1 CH_egr_20 17 27 1.16771e-32
Eucalyptus grandis Chr07 1 CH_egr_249 7 11 0.0000000000219768
Eucalyptus grandis Chr04 1 CH_egr_95 11 18 1.28376e-19
Erythranthe guttata scaffold_2 1 CH_egut_146 4 5 0.0000000423415
Erythranthe guttata scaffold_12 1 CH_egut_147 4 5 0.0000000423415
Eutrema salsugineum scaffold_2 1 CH_esa_58 5 7 0.00000000199297
Gossypium hirsutum A11 1 CH_ghi_142 5 5 0.000000000287055
Gossypium hirsutum A04 1 CH_ghi_184 5 7 0.00000000601526
Gossypium hirsutum A01 1 CH_ghi_269 4 4 0.00000022396
Gossypium hirsutum D11 1 CH_ghi_270 4 4 0.00000022396
Gossypium hirsutum D04 1 CH_ghi_67 7 8 0.00000000000000365169
Glycine max Gm17 1 CH_gma_186 4 5 0.000000372999
Glycine max Gm08 1 CH_gma_54 6 8 0.00000000000223259
Gossypium raimondii Chr12 1 CH_gra_24 8 11 6.86376e-17
Gossypium raimondii Chr07 1 CH_gra_44 6 6 0.000000000000257414
Helianthus annuus HanXRQChr03 1 CH_han_203 5 11 0.0000000180694
Helianthus annuus HanXRQChr03 1 CH_han_307 4 7 0.00000151083
Hydrangea macrophylla Hma1.2p1_0766F.1 1 CH_hma_11 6 8 0.00000000000314975
Hydrangea macrophylla Hma1.2p1_0757F.1 1 CH_hma_375 3 5 0.000540314
Lotus japonicus chr4 1 CH_lja_69 5 7 0.000000000404226
Lonicera japonica GWHAAZE00000009 1 CH_lonja_23 10 21 2.08067e-22
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_127 5 10 0.00000000426917
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_237 4 8 0.00000148938
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_360 3 4 0.000103688
Magnolia biondii Chr14 1 CH_mbi_46 6 6 0.000000000000031898
Magnolia biondii Chr02 1 CH_mbi_479 3 4 0.000162349
Magnolia biondii Chr05 1 CH_mbi_5 14 56 2.66104e-26
Malus domestica Chr08 1 CH_mdo_101 6 13 0.0000000000613204
Malus domestica Chr12 1 CH_mdo_110 6 15 0.000000000178577
Malus domestica Chr11 1 CH_mdo_316 4 9 0.0000055599
Malus domestica Chr04 1 CH_mdo_527 3 4 0.000190548
Malus domestica Chr03 1 CH_mdo_60 7 15 0.000000000000200428
Malus domestica Chr01 1 CH_mdo_97 5 5 0.0000000000403122
Manihot esculenta Chromosome07 1 CH_mes_170 4 4 0.0000000764618
Manihot esculenta Chromosome02 1 CH_mes_308 3 3 0.0000642102
Manihot esculenta Chromosome10 1 CH_mes_309 3 3 0.0000642102
Manihot esculenta Chromosome12 1 CH_mes_87 6 10 0.0000000000209676
Medicago truncatula chr4 1 CH_mtr_101 6 7 0.000000000000130108
Medicago truncatula chr8 1 CH_mtr_283 5 16 0.000000100631
Medicago truncatula chr7 1 CH_mtr_6 15 25 2.33389e-36
Nelumbo nucifera chr2 1 CH_nnu_253 4 9 0.0000185671
Nelumbo nucifera chr2 1 CH_nnu_3 19 25 1.63062e-46
Nelumbo nucifera chr1 1 CH_nnu_419 3 4 0.000452521
Nelumbo nucifera chr8 1 CH_nnu_52 7 26 0.000000000192944
Nelumbo nucifera chr7 1 CH_nnu_60 5 6 0.00000000114207
Oryza sativa ssp. japonica chr07 1 CH_osa_11 10 26 1.51419e-18
Oryza sativa ssp. japonica chr07 1 CH_osa_334 3 4 0.000348171
Oryza sativa ssp. japonica chr08 1 CH_osa_41 7 22 0.000000000022678
Petunia axillaris Peaxi162Scf00003 1 CH_pax_322 3 8 0.000472875
Punica granatum NC_045131.1 1 CH_pgr_36 6 10 0.00000000000113235
Prunus persica Pp06 1 CH_ppe_132 6 20 0.00000000267504
Prunus persica Pp04 1 CH_ppe_64 7 12 0.0000000000000575806
Pisum sativum chr7LG7 1 CH_psa_258 4 30 0.000145858
Pisum sativum chr3LG5 1 CH_psa_40 5 7 0.0000000000619091
Papaver somniferum NC_039363.1 1 CH_pso_11 15 71 6.04994e-27
Papaver somniferum NW_020619936.1 1 CH_pso_22 11 35 7.51987e-21
Papaver somniferum NC_039366.1 1 CH_pso_34 10 39 1.40759e-17
Papaver somniferum NW_020650859.1 1 CH_pso_48 8 18 0.0000000000000014341
Papaver somniferum NC_039358.1 1 CH_pso_556 3 4 0.000269378
Populus trichocarpa Chr01 1 CH_ptr_140 5 7 0.00000000610132
Populus trichocarpa Chr01 1 CH_ptr_183 4 4 0.000000197592
Populus trichocarpa Chr07 1 CH_ptr_184 4 4 0.000000197592
Populus trichocarpa Chr09 1 CH_ptr_42 8 11 1.35969e-16
Populus trichocarpa Chr06 1 CH_ptr_64 7 11 0.000000000000195752
Phaseolus vulgaris Chr02 1 CH_pvu_186 4 6 0.00000131487
Phaseolus vulgaris Chr01 1 CH_pvu_24 8 9 1.60202e-18
Phaseolus vulgaris Chr07 1 CH_pvu_252 3 3 0.0000683118
Quercus lobata 7 1 CH_qlo_212 10 69 0.0000000000156405
Quercus lobata 1 1 CH_qlo_26 14 25 2.74133e-27
Quercus lobata 11 1 CH_qlo_576 6 39 0.0000103334
Quercus lobata 8 1 CH_qlo_593 5 18 0.0000137846
Quercus lobata 4 1 CH_qlo_706 4 8 0.0000553935
Quercus lobata 11 1 CH_qlo_849 4 11 0.000259829
Quercus lobata 3 1 CH_qlo_850 4 11 0.000259829
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_255 7 70 0.0000000728718
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_68 9 36 0.00000000000000529349
Rhododendron simsii chr05 1 CH_rsi_249 3 4 0.00000299772
Salix brachista GWHAAZH00000009 1 CH_sbr_142 4 7 0.00000121565
Salix brachista GWHAAZH00000016 1 CH_sbr_399 3 6 0.00071122
Salix brachista GWHAAZH00000006 1 CH_sbr_70 5 7 0.000000000690025
Simmondsia chinensis GWHAASQ00000011 1 CH_sci_60 4 8 0.000000129564
Sechium edule LG07 1 CH_sed_110 5 17 0.000000781094
Sechium edule LG04 1 CH_sed_219 3 3 0.0000754316
Sechium edule LG03 1 CH_sed_220 3 3 0.0000754316
Sechium edule LG02 1 CH_sed_221 3 3 0.0000754316
Sechium edule LG06 1 CH_sed_222 3 3 0.0000754316
Sechium edule LG10 1 CH_sed_223 3 3 0.0000754316
Sequoiadendron giganteum chr5 1 CH_sgi_118 9 11 4.2664e-18
Sequoiadendron giganteum chr1 1 CH_sgi_119 11 27 4.67609e-18
Sequoiadendron giganteum chr1 1 CH_sgi_1269 4 11 0.000425251
Sequoiadendron giganteum HRSCAF_1 1 CH_sgi_1343 3 3 0.000558356
Sequoiadendron giganteum chr11 1 CH_sgi_139 9 14 1.54368e-16
Sequoiadendron giganteum chr5 1 CH_sgi_61 14 31 9.04368e-25
Schrenkiella parvula ch6-6 1 CH_spa_107 4 5 0.000000483059
Schrenkiella parvula ch5-1 1 CH_spa_56 5 6 0.000000000753137
Solanum tuberosum ST4.03ch09 1 CH_stu_344 3 4 0.000027894
Trochodendron aralioides group2 1 CH_tar_218 4 13 0.0000188717
Trochodendron aralioides group18 1 CH_tar_300 3 4 0.000117914
Theobroma cacao Chromosome_1 1 CH_tca_130 5 11 0.0000000275931
Theobroma cacao Chromosome_2 1 CH_tca_214 4 7 0.00000190791
Theobroma cacao Chromosome_9 1 CH_tca_267 3 3 0.0000481481
Theobroma cacao Chromosome_5 1 CH_tca_404 3 5 0.000480626
Theobroma cacao Chromosome_5 1 CH_tca_55 6 9 0.00000000000534342
Tarenaya hassleriana NW_010960188.1 1 CH_tha_97 3 3 0.0000328952
Trifolium pratense Tp57577_TGAC_v2_scaf_259 1 CH_tpr_107 4 6 0.000000246609
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_271 4 22 0.000118973
Trifolium pratense Tp57577_TGAC_v2_scaf_198 1 CH_tpr_277 3 5 0.000197434
Tripterygium wilfordii NC_052248.1 1 CH_twi_169 3 3 0.0000460639
Tripterygium wilfordii NC_052244.1 1 CH_twi_323 3 6 0.000919065
Tripterygium wilfordii NC_052244.1 1 CH_twi_57 5 6 0.000000000285859
Tripterygium wilfordii NC_052234.1 1 CH_twi_90 4 4 0.0000000475124
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_190 3 3 0.0000297916
Vigna mungo CM024069.1 1 CH_vmu_140 4 10 0.00000692248
Vigna mungo CM024073.1 1 CH_vmu_246 3 4 0.000136573
Zea mays 1 1 CH_zma_140 3 3 0.0000387465
Acer truncatum chr8 2 CH_acertr_520 3 9 0.000605141
Acer truncatum chr3 2 CH_acertr_58 5 9 0.000000000270979
Actinidia chinensis Lachesis_group5 2 CH_ach_27 4 4 0.0000000251806
Arabidopsis lyrata scaffold_4 2 CH_aly_131 4 4 0.000000252634
Arabidopsis lyrata scaffold_5 2 CH_aly_156 4 5 0.00000126149
Arabidopsis lyrata scaffold_6 2 CH_aly_273 3 3 0.000153091
Arabidopsis lyrata scaffold_4 2 CH_aly_274 3 3 0.000153091
Arabidopsis lyrata scaffold_6 2 CH_aly_399 3 4 0.000611586
Arabidopsis lyrata scaffold_8 2 CH_aly_56 5 5 0.000000000408577
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 2 CH_amhyb_5 7 8 1.12936e-17
Aquilegia oxysepala CHR06 2 CH_aox_25 5 6 0.0000000000288535
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 2 CH_arhy_102 6 9 0.000000000000425175
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_158 5 8 0.000000000461819
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 2 CH_arhy_396 3 3 0.0000204091
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_397 3 3 0.0000204091
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 2 CH_arhy_398 3 3 0.0000204091
Arabidopsis thaliana Chr3 2 CH_ath_199 4 13 0.0000115601
Arabidopsis thaliana Chr5 2 CH_ath_285 3 4 0.0000964745
Arabidopsis thaliana Chr3 2 CH_ath_48 6 16 0.0000000000549622
Arabidopsis thaliana Chr5 2 CH_ath_57 5 7 0.000000000224579
Amborella trichopoda AmTr_v1.0_scaffold00046 2 CH_atr_101 4 5 0.000000393393
Amborella trichopoda AmTr_v1.0_scaffold00049 2 CH_atr_153 3 3 0.000061959
Amborella trichopoda AmTr_v1.0_scaffold00012 2 CH_atr_3 16 23 2.01053e-38
Brassica carinata ChrC04 2 CH_bca_11 10 19 9.88332e-19
Brassica carinata ChrB08 2 CH_bca_13 9 13 4.93671e-18
Brassica carinata ChrC01 2 CH_bca_406 4 5 0.00000338471
Brassica carinata ChrB05 2 CH_bca_407 4 5 0.00000338471
Brassica carinata ChrB01 2 CH_bca_477 4 6 0.0000101409
Brassica carinata ChrB01 2 CH_bca_902 3 3 0.000417214
Brassica oleracea C3 2 CH_bol_137 4 5 0.000000786295
Brassica oleracea C9 2 CH_bol_17 10 27 3.60617e-18
Brassica oleracea C2 2 CH_bol_257 4 12 0.0000773016
Brassica rapa A06 2 CH_bra_119 4 5 0.00000115196
Brassica rapa A06 2 CH_bra_248 3 3 0.000158017
Brassica rapa A10 2 CH_bra_5 10 13 4.62361e-22
Beta vulgaris Chr7_EL10_PGA_scaffold5 2 CH_bvu_20 6 6 0.00000000000000237563
Camellia sinensis var. sinensis Chr10 2 CH_camsi_117 6 10 0.0000000000246501
Camellia sinensis var. sinensis Chr1 2 CH_camsi_134 5 5 0.000000000104879
Camellia sinensis var. sinensis Chr4 2 CH_camsi_219 5 9 0.0000000131642
Camellia sinensis var. sinensis Chr4 2 CH_camsi_28 11 35 6.2642e-20
Camellia sinensis var. sinensis Chr13 2 CH_camsi_53 11 71 0.00000000000000472127
Cannabis sativa NC_044371.1 2 CH_cansat_131 4 7 0.000000375445
Cannabis sativa NC_044370.1 2 CH_cansat_158 4 10 0.00000224872
Cannabis sativa NC_044373.1 2 CH_cansat_354 3 7 0.00051947
Cicer arietinum L. Ca_LG3_v3 2 CH_car_190 3 5 0.000120716
Cicer arietinum L. Ca_LG6_v3 2 CH_car_36 4 5 0.000000042306
Corylus avellana 9 2 CH_cav_160 6 34 0.00000248398
Corylus avellana 10 2 CH_cav_43 6 8 0.000000000054028
Corylus avellana 11 2 CH_cav_44 6 8 0.000000000054028
Corylus avellana 2 2 CH_cav_47 6 9 0.000000000161812
Corylus avellana 2 2 CH_cav_51 6 10 0.000000000403849
Corylus avellana 6 2 CH_cav_52 6 10 0.000000000403849
Coffea canephora chr0 2 CH_ccan_171 4 78 0.0000152704
Coffea canephora chr3 2 CH_ccan_364 3 31 0.000730772
Coffea canephora chr0 2 CH_ccan_367 3 32 0.000806328
Citrus clementina scaffold_8 2 CH_ccl_209 4 9 0.00000310788
Citrus clementina scaffold_7 2 CH_ccl_348 3 4 0.0001049
Ceratophyllum demersum 1 2 CH_cde_42 4 7 0.000000548631
Ceratophyllum demersum 7 2 CH_cde_63 3 3 0.0000189386
Carpinus fangiana Cfa02 2 CH_cfa_129 4 6 0.00000070177
Carpinus fangiana Cfa01 2 CH_cfa_15 9 11 2.36539e-21
Carpinus fangiana Cfa02 2 CH_cfa_200 3 3 0.0000426755
Cardamine hirsuta NSCAFA.214I 2 CH_chi_326 3 3 0.000221136
Cardamine hirsuta Chr2 2 CH_chi_327 3 3 0.000221136
Cardamine hirsuta Chr6 2 CH_chi_328 3 3 0.000221136
Cardamine hirsuta Chr5 2 CH_chi_38 9 26 0.0000000000000239533
Cardamine hirsuta Chr8 2 CH_chi_72 5 5 0.000000000784591
Carya illinoinensis Chr01 2 CH_cil_100 6 6 0.000000000002949
Carya illinoinensis Chr10 2 CH_cil_159 5 5 0.00000000144157
Carya illinoinensis Chr10 2 CH_cil_224 5 9 0.00000018038
Carya illinoinensis Chr07 2 CH_cil_237 5 10 0.000000360134
Carya illinoinensis Chr13 2 CH_cil_246 4 4 0.000000694191
Carya illinoinensis Chr09 2 CH_cil_266 5 13 0.0000018297
Carya illinoinensis Chr06 2 CH_cil_29 10 12 2.90963e-21
Carya illinoinensis Chr05 2 CH_cil_456 3 3 0.000329383
Citrullus lanatus CG_Chr09 2 CH_cla_72 6 69 0.00000143279
Cucumis melo chr04 2 CH_cme_136 3 3 0.0000153543
Cucumis melo chr11 2 CH_cme_60 5 10 0.00000000198336
Carica papaya supercontig_129 2 CH_cpa_108 3 3 0.0000038773
Chenopodium quinoa C_Quinoa_Scaffold_2465 2 CH_cqu_3 13 13 9.2858e-35
Chenopodium quinoa C_Quinoa_Scaffold_2751 2 CH_cqu_404 3 4 0.000280282
Chenopodium quinoa C_Quinoa_Scaffold_1337 2 CH_cqu_64 6 11 0.0000000000445107
Chenopodium quinoa C_Quinoa_Scaffold_2716 2 CH_cqu_71 5 5 0.0000000000888128
Capsella rubella scaffold_5 2 CH_cru_176 4 5 0.00000113943
Capsella rubella scaffold_6 2 CH_cru_293 3 3 0.000138698
Capsella rubella scaffold_8 2 CH_cru_73 5 5 0.000000000367091
Capsella rubella scaffold_5 2 CH_cru_92 5 7 0.00000000768817
Cucumis sativus L. chr2 2 CH_csa_158 4 10 0.00000746629
Cucumis sativus L. chr3 2 CH_csa_179 3 3 0.0000342433
Cucumis sativus L. chr7 2 CH_csa_234 3 4 0.00013686
Daucus carota DCARv2_Chr1 2 CH_dca_260 3 5 0.0000938726
Davidia involucrata GWHABJS00000021 2 CH_din_105 4 4 0.0000000277035
Davidia involucrata GWHABJS00000015 2 CH_din_229 3 3 0.0000316516
Davidia involucrata GWHABJS00000007 2 CH_din_484 3 6 0.000631739
Durio zibethinus NW_019167937.1 2 CH_dzi_185 3 3 0.0000397677
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_24 9 28 5.82483e-16
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_301 3 3 0.0000667496
Erigeron canadensis Conyza_canadensis_scaffold:6 2 CH_eca_63 5 5 0.0000000000790369
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_74 6 18 0.00000000153058
Erigeron canadensis Conyza_canadensis_scaffold:5 2 CH_eca_8 10 21 2.89116e-20
Eucalyptus grandis Chr08 2 CH_egr_107 10 14 1.47869e-18
Eucalyptus grandis Chr11 2 CH_egr_20 17 27 1.16771e-32
Eucalyptus grandis Chr07 2 CH_egr_249 7 11 0.0000000000219768
Eucalyptus grandis Chr08 2 CH_egr_321 6 9 0.0000000019554
Eucalyptus grandis Chr07 2 CH_egr_534 5 10 0.000002015
Eucalyptus grandis Chr08 2 CH_egr_601 4 5 0.0000137962
Eucalyptus grandis Chr07 2 CH_egr_615 7 59 0.000020135
Eucalyptus grandis Chr03 2 CH_egr_644 4 6 0.0000412904
Eucalyptus grandis Chr09 2 CH_egr_723 4 7 0.0000961159
Eucalyptus grandis Chr01 2 CH_egr_944 3 3 0.000935713
Eucalyptus grandis Chr04 2 CH_egr_95 11 18 1.28376e-19
Erythranthe guttata scaffold_2 2 CH_egut_146 4 5 0.0000000423415
Erythranthe guttata scaffold_12 2 CH_egut_147 4 5 0.0000000423415
Eutrema salsugineum scaffold_2 2 CH_esa_58 5 7 0.00000000199297
Gossypium hirsutum A11 2 CH_ghi_142 5 5 0.000000000287055
Gossypium hirsutum A04 2 CH_ghi_184 5 7 0.00000000601526
Gossypium hirsutum A01 2 CH_ghi_269 4 4 0.00000022396
Gossypium hirsutum D11 2 CH_ghi_270 4 4 0.00000022396
Gossypium hirsutum D11 2 CH_ghi_511 6 78 0.0000864648
Gossypium hirsutum D04 2 CH_ghi_67 7 8 0.00000000000000365169
Glycine max Gm17 2 CH_gma_186 4 5 0.000000372999
Glycine max Gm08 2 CH_gma_54 6 8 0.00000000000223259
Gossypium raimondii Chr12 2 CH_gra_24 8 11 6.86376e-17
Gossypium raimondii Chr07 2 CH_gra_44 6 6 0.000000000000257414
Helianthus annuus HanXRQChr03 2 CH_han_203 5 11 0.0000000180694
Helianthus annuus HanXRQChr03 2 CH_han_307 4 7 0.00000151083
Hydrangea macrophylla Hma1.2p1_0766F.1 2 CH_hma_11 6 8 0.00000000000314975
Hydrangea macrophylla Hma1.2p1_0757F.1 2 CH_hma_375 3 5 0.000540314
Lotus japonicus chr3 2 CH_lja_231 3 3 0.0000251279
Lotus japonicus chr4 2 CH_lja_69 5 7 0.000000000404226
Lonicera japonica GWHAAZE00000009 2 CH_lonja_23 10 21 2.08067e-22
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_127 5 10 0.00000000426917
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_237 4 8 0.00000148938
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_360 3 4 0.000103688
Magnolia biondii Chr14 2 CH_mbi_46 6 6 0.000000000000031898
Magnolia biondii Chr02 2 CH_mbi_479 3 4 0.000162349
Magnolia biondii Chr05 2 CH_mbi_5 14 56 2.66104e-26
Malus domestica Chr08 2 CH_mdo_101 6 13 0.0000000000613204
Malus domestica Chr12 2 CH_mdo_110 6 15 0.000000000178577
Malus domestica Chr11 2 CH_mdo_316 4 9 0.0000055599
Malus domestica Chr04 2 CH_mdo_527 3 4 0.000190548
Malus domestica Chr03 2 CH_mdo_60 7 15 0.000000000000200428
Malus domestica Chr01 2 CH_mdo_97 5 5 0.0000000000403122
Manihot esculenta Chromosome07 2 CH_mes_170 4 4 0.0000000764618
Manihot esculenta Chromosome02 2 CH_mes_308 3 3 0.0000642102
Manihot esculenta Chromosome10 2 CH_mes_309 3 3 0.0000642102
Manihot esculenta Chromosome12 2 CH_mes_87 6 10 0.0000000000209676
Nelumbo nucifera chr2 2 CH_nnu_253 4 9 0.0000185671
Nelumbo nucifera chr2 2 CH_nnu_3 19 25 1.63062e-46
Nelumbo nucifera chr1 2 CH_nnu_419 3 4 0.000452521
Nelumbo nucifera chr8 2 CH_nnu_52 7 26 0.000000000192944
Nelumbo nucifera chr7 2 CH_nnu_60 5 6 0.00000000114207
Oryza sativa ssp. japonica chr07 2 CH_osa_11 10 26 1.51419e-18
Oryza sativa ssp. japonica chr07 2 CH_osa_334 3 4 0.000348171
Oryza sativa ssp. japonica chr08 2 CH_osa_41 7 22 0.000000000022678
Petunia axillaris Peaxi162Scf00003 2 CH_pax_322 3 8 0.000472875
Punica granatum NC_045131.1 2 CH_pgr_36 6 10 0.00000000000113235
Prunus persica Pp06 2 CH_ppe_132 6 20 0.00000000267504
Prunus persica Pp04 2 CH_ppe_64 7 12 0.0000000000000575806
Pisum sativum chr7LG7 2 CH_psa_258 4 30 0.000145858
Pisum sativum chr3LG5 2 CH_psa_40 5 7 0.0000000000619091
Papaver somniferum NC_039363.1 2 CH_pso_11 15 71 6.04994e-27
Papaver somniferum NW_020619936.1 2 CH_pso_22 11 35 7.51987e-21
Papaver somniferum NC_039366.1 2 CH_pso_34 10 39 1.40759e-17
Papaver somniferum NW_020650859.1 2 CH_pso_48 8 18 0.0000000000000014341
Papaver somniferum NC_039358.1 2 CH_pso_556 3 4 0.000269378
Populus trichocarpa Chr01 2 CH_ptr_140 5 7 0.00000000610132
Populus trichocarpa Chr01 2 CH_ptr_183 4 4 0.000000197592
Populus trichocarpa Chr07 2 CH_ptr_184 4 4 0.000000197592
Populus trichocarpa Chr09 2 CH_ptr_42 8 11 1.35969e-16
Populus trichocarpa Chr06 2 CH_ptr_64 7 11 0.000000000000195752
Phaseolus vulgaris Chr02 2 CH_pvu_186 4 6 0.00000131487
Phaseolus vulgaris Chr01 2 CH_pvu_24 8 9 1.60202e-18
Phaseolus vulgaris Chr07 2 CH_pvu_252 3 3 0.0000683118
Quercus lobata 7 2 CH_qlo_212 10 69 0.0000000000156405
Quercus lobata 1 2 CH_qlo_26 14 25 2.74133e-27
Quercus lobata 11 2 CH_qlo_576 6 39 0.0000103334
Quercus lobata 8 2 CH_qlo_593 5 18 0.0000137846
Quercus lobata 4 2 CH_qlo_706 4 8 0.0000553935
Quercus lobata 11 2 CH_qlo_849 4 11 0.000259829
Quercus lobata 3 2 CH_qlo_850 4 11 0.000259829
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_255 7 70 0.0000000728718
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_68 9 36 0.00000000000000529349
Rhododendron simsii chr05 2 CH_rsi_249 3 4 0.00000299772
Salix brachista GWHAAZH00000009 2 CH_sbr_142 4 7 0.00000121565
Salix brachista GWHAAZH00000016 2 CH_sbr_399 3 6 0.00071122
Salix brachista GWHAAZH00000006 2 CH_sbr_70 5 7 0.000000000690025
Simmondsia chinensis GWHAASQ00000011 2 CH_sci_60 4 8 0.000000129564
Sechium edule LG07 2 CH_sed_110 5 17 0.000000781094
Sechium edule LG04 2 CH_sed_219 3 3 0.0000754316
Sechium edule LG03 2 CH_sed_220 3 3 0.0000754316
Sechium edule LG02 2 CH_sed_221 3 3 0.0000754316
Sechium edule LG06 2 CH_sed_222 3 3 0.0000754316
Sechium edule LG10 2 CH_sed_223 3 3 0.0000754316
Sequoiadendron giganteum chr5 2 CH_sgi_118 9 11 4.2664e-18
Sequoiadendron giganteum chr1 2 CH_sgi_119 11 27 4.67609e-18
Sequoiadendron giganteum chr1 2 CH_sgi_1269 4 11 0.000425251
Sequoiadendron giganteum HRSCAF_1 2 CH_sgi_1343 3 3 0.000558356
Sequoiadendron giganteum chr11 2 CH_sgi_139 9 14 1.54368e-16
Sequoiadendron giganteum chr5 2 CH_sgi_61 14 31 9.04368e-25
Schrenkiella parvula ch6-6 2 CH_spa_107 4 5 0.000000483059
Schrenkiella parvula ch5-1 2 CH_spa_56 5 6 0.000000000753137
Solanum tuberosum ST4.03ch09 2 CH_stu_344 3 4 0.000027894
Trochodendron aralioides group2 2 CH_tar_218 4 13 0.0000188717
Trochodendron aralioides group18 2 CH_tar_300 3 4 0.000117914
Theobroma cacao Chromosome_1 2 CH_tca_130 5 11 0.0000000275931
Theobroma cacao Chromosome_2 2 CH_tca_214 4 7 0.00000190791
Theobroma cacao Chromosome_9 2 CH_tca_267 3 3 0.0000481481
Theobroma cacao Chromosome_5 2 CH_tca_404 3 5 0.000480626
Theobroma cacao Chromosome_5 2 CH_tca_55 6 9 0.00000000000534342
Tarenaya hassleriana NW_010960188.1 2 CH_tha_97 3 3 0.0000328952
Trifolium pratense Tp57577_TGAC_v2_scaf_259 2 CH_tpr_107 4 6 0.000000246609
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_271 4 22 0.000118973
Trifolium pratense Tp57577_TGAC_v2_scaf_198 2 CH_tpr_277 3 5 0.000197434
Tripterygium wilfordii NC_052248.1 2 CH_twi_169 3 3 0.0000460639
Tripterygium wilfordii NC_052244.1 2 CH_twi_323 3 6 0.000919065
Tripterygium wilfordii NC_052244.1 2 CH_twi_57 5 6 0.000000000285859
Tripterygium wilfordii NC_052234.1 2 CH_twi_90 4 4 0.0000000475124
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_190 3 3 0.0000297916
Vigna mungo CM024069.1 2 CH_vmu_140 4 10 0.00000692248
Vigna mungo CM024073.1 2 CH_vmu_246 3 4 0.000136573
Zea mays 1 2 CH_zma_140 3 3 0.0000387465

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001