Functional clusters

Information

  • Type MapMan
  • Description Protein modification.glycosylation.O-linked glycosylation.serine/threonine O-linked glycosylation.O-fucosyltransferase (OFT1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C5 1 CH_bol_329 2 3 0.000294167
Camellia sinensis var. sinensis Chr8 1 CH_camsi_902 2 4 0.000825322
Gossypium raimondii Chr11 1 CH_gra_456 2 3 0.000964932
Helianthus annuus HanXRQChr05 1 CH_han_568 2 2 0.000231857
Magnolia biondii Chr18 1 CH_mbi_413 2 3 0.000145695
Phaseolus vulgaris Chr06 1 CH_pvu_335 2 3 0.00022041
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_474 2 2 0.0000398653
Sequoiadendron giganteum chr9 1 CH_sgi_827 2 2 0.0000487151
Trifolium pratense Tp57577_TGAC_v2_scaf_221 1 CH_tpr_305 2 2 0.000227092
Vigna mungo CM024075.1 1 CH_vmu_262 2 3 0.000193836
Brassica oleracea C5 2 CH_bol_329 2 3 0.000294167
Camellia sinensis var. sinensis Chr8 2 CH_camsi_902 2 4 0.000825322
Gossypium raimondii Chr11 2 CH_gra_456 2 3 0.000964932
Helianthus annuus HanXRQChr05 2 CH_han_568 2 2 0.000231857
Magnolia biondii Chr18 2 CH_mbi_413 2 3 0.000145695
Phaseolus vulgaris Chr06 2 CH_pvu_335 2 3 0.00022041
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_474 2 2 0.0000398653
Sequoiadendron giganteum chr9 2 CH_sgi_827 2 2 0.0000487151
Trifolium pratense Tp57577_TGAC_v2_scaf_221 2 CH_tpr_305 2 2 0.000227092
Vigna mungo CM024075.1 2 CH_vmu_262 2 3 0.000193836

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001