Functional clusters
Information
- Type MapMan
- Description Protein modification.glycosylation.N-linked glycosylation.dolichol-phosphate-glucose synthase (ALG5)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica carinata | ChrC01 | 1 | CH_bca_717 | 2 | 2 | 0.000128259 |
Cardamine hirsuta | Chr4 | 1 | CH_chi_249 | 2 | 2 | 0.0000691204 |
Olea europaea | chr1 | 1 | CH_oeu_177 | 2 | 2 | 0.0000533789 |
Selaginella moellendorffii | scaffold_25 | 1 | CH_smo_122 | 2 | 2 | 0.000280112 |
Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_257 | 2 | 2 | 0.0000929238 |
Brassica carinata | ChrC01 | 2 | CH_bca_717 | 2 | 2 | 0.000128259 |
Cardamine hirsuta | Chr4 | 2 | CH_chi_249 | 2 | 2 | 0.0000691204 |
Olea europaea | chr1 | 2 | CH_oeu_177 | 2 | 2 | 0.0000533789 |
Selaginella moellendorffii | scaffold_25 | 2 | CH_smo_122 | 2 | 2 | 0.000280112 |
Vaccinium macrocarpon | chr8_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_257 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |