Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation elongation.eEF5 poly-P/G elongation factor activity.regulatory eEF5 hypusination.deoxyhypusine synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Gossypium raimondii Chr11 1 CH_gra_245 2 2 0.0000536107
Lactuca sativa Lsat_1_v8_lg_8 1 CH_lsa_376 2 3 0.000154198
Solanum lycopersicum SL4.0ch02 1 CH_sly_321 2 2 0.0000586941
Solanum pennellii Spenn-ch02 1 CH_spe_275 2 2 0.000044479
Gossypium hirsutum A10 2 CH_ghi_544 2 2 0.000160209
Gossypium hirsutum D10 2 CH_ghi_545 2 2 0.000160209
Gossypium raimondii Chr11 2 CH_gra_245 2 2 0.0000536107
Lactuca sativa Lsat_1_v8_lg_8 2 CH_lsa_376 2 3 0.000154198
Solanum lycopersicum SL4.0ch02 2 CH_sly_321 2 2 0.0000586941
Solanum pennellii Spenn-ch02 2 CH_spe_275 2 2 0.000044479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001