Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2-alpha kinase (GCN2)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_3 1 CH_ccl_293 2 2 0.0000820311
Cardamine hirsuta Chr5 1 CH_chi_224 2 2 0.0000691204
Carya illinoinensis Chr01 1 CH_cil_398 2 3 0.000185943
Citrullus lanatus CG_Chr08 1 CH_cla_153 2 3 0.000266123
Carica papaya supercontig_9 1 CH_cpa_268 2 3 0.000285185
Lonicera japonica GWHAAZE00000006 1 CH_lonja_439 2 3 0.000179657
Nelumbo nucifera chr1 1 CH_nnu_137 3 19 0.00000276233
Petunia axillaris Peaxi162Scf00126 1 CH_pax_193 2 2 0.0000703556
Vigna mungo CM024076.1 1 CH_vmu_192 2 2 0.0000646141
Citrus clementina scaffold_3 2 CH_ccl_293 2 2 0.0000820311
Cardamine hirsuta Chr5 2 CH_chi_224 2 2 0.0000691204
Carya illinoinensis Chr01 2 CH_cil_398 2 3 0.000185943
Citrullus lanatus CG_Chr08 2 CH_cla_153 2 3 0.000266123
Carica papaya supercontig_9 2 CH_cpa_268 2 3 0.000285185
Lonicera japonica GWHAAZE00000006 2 CH_lonja_439 2 3 0.000179657
Nelumbo nucifera chr1 2 CH_nnu_137 3 19 0.00000276233
Petunia axillaris Peaxi162Scf00126 2 CH_pax_193 2 2 0.0000703556
Vigna mungo CM024076.1 2 CH_vmu_192 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001