Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2-GDP recycling complex (eIF2B).component eIF2B-epsilon

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB02 1 CH_bca_842 2 2 0.000320646
Brassica carinata ChrB06 1 CH_bca_843 2 2 0.000320646
Carica papaya supercontig_117 1 CH_cpa_164 2 2 0.0000950661
Salix brachista GWHAAZH00000016 1 CH_sbr_269 2 2 0.000189042
Sequoiadendron giganteum chr2 1 CH_sgi_475 3 5 0.0000000355966
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_294 2 2 0.000227092
Vitis vinifera chr11 1 CH_vvi_59 6 30 0.000000000000247746
Brassica carinata ChrB02 2 CH_bca_842 2 2 0.000320646
Brassica carinata ChrB06 2 CH_bca_843 2 2 0.000320646
Carica papaya supercontig_117 2 CH_cpa_164 2 2 0.0000950661
Salix brachista GWHAAZH00000016 2 CH_sbr_269 2 2 0.000189042
Sequoiadendron giganteum chr2 2 CH_sgi_475 3 5 0.0000000355966
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_294 2 2 0.000227092
Vitis vinifera chr11 2 CH_vvi_59 6 30 0.000000000000247746

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001