Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).peripheral components.component SRm160

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_81 1 CH_cpa_195 2 2 0.0000950661
Capsella rubella scaffold_4 1 CH_cru_258 2 2 0.0000731154
Helianthus annuus HanXRQChr08 1 CH_han_304 3 11 0.00000147797
Lactuca sativa Lsat_1_v8_lg_9 1 CH_lsa_329 2 2 0.0000514007
Physcomitrium patens Chr03 1 CH_ppa_146 2 2 0.000183818
Carica papaya supercontig_81 2 CH_cpa_195 2 2 0.0000950661
Capsella rubella scaffold_4 2 CH_cru_258 2 2 0.0000731154
Helianthus annuus HanXRQChr08 2 CH_han_304 3 11 0.00000147797
Lactuca sativa Lsat_1_v8_lg_9 2 CH_lsa_329 2 2 0.0000514007
Physcomitrium patens Chr03 2 CH_ppa_146 2 2 0.000183818

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001