Functional clusters
Information
- Type MapMan
- Description Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component CASC3
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group2 | 1 | CH_ach_131 | 2 | 2 | 0.000162964 |
Carica papaya | supercontig_67 | 1 | CH_cpa_194 | 2 | 2 | 0.0000950661 |
Lonicera japonica | GWHAAZE00000009 | 1 | CH_lonja_459 | 2 | 2 | 0.000179662 |
Malus domestica | Chr17 | 1 | CH_mdo_550 | 2 | 2 | 0.000227527 |
Physcomitrium patens | Chr17 | 1 | CH_ppa_130 | 2 | 3 | 0.000183812 |
Actinidia chinensis | Lachesis_group2 | 2 | CH_ach_131 | 2 | 2 | 0.000162964 |
Carica papaya | supercontig_67 | 2 | CH_cpa_194 | 2 | 2 | 0.0000950661 |
Lonicera japonica | GWHAAZE00000009 | 2 | CH_lonja_459 | 2 | 2 | 0.000179662 |
Malus domestica | Chr17 | 2 | CH_mdo_550 | 2 | 2 | 0.000227527 |
Physcomitrium patens | Chr17 | 2 | CH_ppa_130 | 2 | 3 | 0.000183812 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |