Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.aminoacyl-tRNA synthetase activities.tyrosine-tRNA ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 1 CH_bca_946 2 2 0.000448905
Brassica oleracea C1 1 CH_bol_389 2 2 0.000490292
Camellia sinensis var. sinensis Chr7 1 CH_camsi_274 3 3 0.000000110392
Camellia sinensis var. sinensis Chr7 1 CH_camsi_319 3 4 0.000000441527
Fragaria vesca Fvb6 1 CH_fve_480 2 2 0.000883652
Helianthus annuus HanXRQChr03 1 CH_han_737 2 2 0.0008115
Helianthus annuus HanXRQChr05 1 CH_han_738 2 2 0.0008115
Lupinus albus Lalb_Chr21 1 CH_lal_324 2 2 0.000314895
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_331 2 2 0.000227092
Brassica carinata ChrC01 2 CH_bca_946 2 2 0.000448905
Brassica oleracea C1 2 CH_bol_389 2 2 0.000490292
Camellia sinensis var. sinensis Chr7 2 CH_camsi_274 3 3 0.000000110392
Camellia sinensis var. sinensis Chr7 2 CH_camsi_319 3 4 0.000000441527
Fragaria vesca Fvb6 2 CH_fve_480 2 2 0.000883652
Helianthus annuus HanXRQChr03 2 CH_han_737 2 2 0.0008115
Helianthus annuus HanXRQChr05 2 CH_han_738 2 2 0.0008115
Lupinus albus Lalb_Chr21 2 CH_lal_324 2 2 0.000314895
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_331 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001