Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (ENP1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carpinus fangiana Cfa04 1 CH_cfa_364 2 3 0.000681569
Erythranthe guttata scaffold_13 1 CH_egut_351 2 2 0.000218444
Papaver somniferum NC_039366.1 1 CH_pso_470 2 2 0.00013514
Rhododendron simsii chr09 1 CH_rsi_402 2 3 0.000193586
Sequoiadendron giganteum chr11 1 CH_sgi_751 2 2 0.0000487151
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_209 2 2 0.0000929238
Carpinus fangiana Cfa04 2 CH_cfa_364 2 3 0.000681569
Erythranthe guttata scaffold_13 2 CH_egut_351 2 2 0.000218444
Papaver somniferum NC_039366.1 2 CH_pso_470 2 2 0.00013514
Rhododendron simsii chr09 2 CH_rsi_402 2 3 0.000193586
Sequoiadendron giganteum chr11 2 CH_sgi_751 2 2 0.0000487151
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_209 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001